Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq324 387 4e-105
seq5128 307 3e-81
seq1273 194 5e-47
seq207 114 4e-23
seq563 104 8e-20
seq3381 102 3e-19
seq4578 82.4 2e-13
seq4818 75.2 4e-11
>seq324
Length=596510
Score = 387 bits (428), Expect = 4e-105
Identities = 266/298 (89%), Gaps = 3/298 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCAT-TTCACAAAGTCGGACTAGAGTCAAGCTCA 295
||||||||||||||||| ||||| | || ||||| | | | ||||||||| |||||||
Sbjct 245349 CTCCCACTTATTCTACATTTCTCA--TTATCTTCACCATGCCAGACTAGAGTTAAGCTCA 245292
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||||||||||||| || ||||||| |||||||| ||||||||||||||| ||| |||
Sbjct 245291 ACAGGGTCTTCTTTATCCTCTGATTCTGCCAAGCCTGTTCCCTTGGCTGTGTTTTTGCTG 245232
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||||||| ||||||||||||||||||| || ||||||| ||| ||| ||||||||||||
Sbjct 245231 GATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTTATGTGCGCCACTAATTAGAT 245172
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475
||||||| |||||||||||| ||||||||||||||||||||| || ||||||| |||||
Sbjct 245171 GACGAGGTATTTGGCTACCTGAAGAGAGTCATAGTTACTCCCACCATTTACCCACGCTTC 245112
Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245111 ATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 245054
Score = 89.7 bits (98), Expect = 2e-15
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| ||| || ||||||| |||| ||| ||||||||||||||| | |||
Sbjct 245654 CTTCTGCTCCACAAGAAGTTTCTGTCCTCCCTGAACTCCCCTTAGGACACCTACATTACC 245595
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||| | |||||| ||||||||||||||| || ||||
Sbjct 245594 ATTTGACAGGTGTAGCACCCCAGTCAAACTCCCCACCTGGCACTGTC 245548
>seq5128
Length=110269
Score = 307 bits (340), Expect = 3e-81
Identities = 247/297 (83%), Gaps = 6/297 (2%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||| | |||||| |||| |||||| | | ||||||||| ||||||||
Sbjct 75129 CTCCCACTTAT---ATACCTCTTGAGTCTTTTCACTGTGCCAGACTAGAGTGAAGCTCAA 75185
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
| ||| || ||||||| ||||||| ||||| || || ||||||||||||||| ||| |
Sbjct 75186 CGGGGACTCATTTCCCCACTGATTCTGCCAAACCTCTTTCCTTGGCTGTGGTTTTGCTGG 75245
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||| || |||||||||||| ||| |||||| ||||
Sbjct 75246 ATAGTAGGTAGGGACAGTGGGAATCTCATTCATCCATTCATGCATGTCCCTAATTGGATG 75305
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
|| | |||||||||||| ||||||||||| |||||||| || || |||||| | ||||
Sbjct 75306 ACAAAGCATTTGGCTACTTTAAGAGAGTCTTAGTTACTTCCACCATTTACCAGAGCTTCA 75365
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||| |||||||||||||||| |||||| || |||||||||||||| ||||||
Sbjct 75366 TTGAAT---TTCACTTTGACATTCACAGCACTAGGTAGAAATCACATTGCATCAACA 75419
>seq1273
Length=389567
Score = 194 bits (214), Expect = 5e-47
Identities = 218/287 (76%), Gaps = 5/287 (2%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295
|||||||||| ||| |||||| || ||||| | | | || || || || | |||
Sbjct 246802 CTCCCACTTAATCTTCACCTCCTGTCTCTCTTCACCATGCCAGGTTTACAGGCAGGTTCA 246743
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
|||| |||||||| ||| | |||| ||||| || | ||||||||||| ||||| |
Sbjct 246742 ACAG--TCTTCTTTGCCCACAGATTTTGCCAAACCA-TCCCCTTGGCTGTAGTTTCATCA 246686
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||| ||| || || ||| ||||| || || |||||||||||| || ||||||||||
Sbjct 246685 GATAATAGGTAAAGAGAGTAGGAATATCATTCATCCATTCATGCATATCCCTAATTAGAT 246626
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474
| ||||||| |||||||| ||||||||| |||||||| ||| | ||| || | || |
Sbjct 246625 GGTGAGGCATGTGGCTACCCTAAGAGAGTAATAGTTACACCCATCAATTTCCCTGAGCCT 246566
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521
||||||||| || ||||||||||| ||| ||||||| |||||||
Sbjct 246565 CAGTGAATTTCTCCATTTTGACATTCAAAGCCCTGGGCAAAAATCAC 246519
>seq207
Length=654021
Score = 114 bits (126), Expect = 4e-23
Identities = 178/252 (71%), Gaps = 22/252 (9%)
Strand=Plus/Minus
Query 284 GAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT--CCCTTGG 341
|||||| ||| |||| |||| || || | |||||| | ||| | | || ||||| |
Sbjct 391510 GAGTCATGCTTAACATGGTCCTCCTTGTCAGCTGATCCTCTCAAACTCATTGCCCCTTAG 391451
Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCG- 400
|||| |||| |||| | |||| |||||| | || || |||||
Sbjct 391450 CTGTTGTTTGACTAGGTT------------AGTGAGAATCTTGG----CCGTTAATGCGT 391407
Query 401 -CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459
| || |||||||||||| ||||||||| ||||||||||||| ||||||||| | | ||
Sbjct 391406 ACATCTCTAATTAGATGATAAGGCATTTGACTACCTTAAGAGACTCATAGTTAGT-CTGC 391348
Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
| |||| | ||| ||||||||||| ||| ||| || | | ||||||||||||||
Sbjct 391347 CATTTATTTAC-CTTCATTGAATTTCTTTACTCTGATGTTGAAGGTACTGGGCAGAAATC 391289
Query 520 ACATTGCGTCAA 531
|||| | ||||
Sbjct 391288 ACATCACATCAA 391277
>seq563
Length=526279
Score = 104 bits (114), Expect = 8e-20
Identities = 116/152 (76%), Gaps = 11/152 (7%)
Strand=Plus/Plus
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||| || |||||||| ||||||| || ||||||| ||| |||| | |||| |||
Sbjct 485180 TCTTTGCCTGCTGATTCTGCCAAGCTAATTGCCTTGGCAGTG-TTTCCATGGATACTAGG 485238
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||| ||||||| | || | |||| || |||||| |||||||| || |||
Sbjct 485239 TAGGGGCAGTGGGGGTT--GT------AGTCATAGGCATCACTATTTAGATGATGAAGCA 485290
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456
|||||||| |||| |||||||||||||||||
Sbjct 485291 TTTGGCTATCTTA--AGAGTCATAGTTACTCC 485320
>seq3381
Length=195216
Score = 102 bits (112), Expect = 3e-19
Identities = 68/76 (89%), Gaps = 0/76 (0%)
Strand=Plus/Plus
Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491
||||||| |||| |||||||||||| || ||||||| | |||| |||||||||||||||
Sbjct 49857 ACCTTAACAGAGGCATAGTTACTCCTGCTGTTTACCTGTGCTTCCTTGAATTTCTTCACT 49916
Query 492 TTGACATTCAGAGCAC 507
||||||||||||||||
Sbjct 49917 TTGACATTCAGAGCAC 49932
>seq4578
Length=133363
Score = 82.4 bits (90), Expect = 2e-13
Identities = 77/98 (79%), Gaps = 4/98 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||| | || || ||||||||| |||| |||| || ||||||||||||||| |||
Sbjct 60203 CTTCTGCCCCACGGGGGATTTCTGTCCTCCCTGAGGCCGCCTTAGGACACCTGCATTACC 60144
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCT 104
||| || | ||| ||||| |||||||||||||||
Sbjct 60143 ATTTGACGGGTGTACCGCC----CCAAACTCCCCACCT 60110
>seq4818
Length=123614
Score = 75.2 bits (82), Expect = 4e-11
Identities = 49/54 (91%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
||||||||| ||||||||||||||| || |||||||||||||||||| ||| ||
Sbjct 79162 TTCTTTCCCTGCTGATTCCGCCAAGGCCTTTCCCTTGGCTGTGGTTTTGCTGGA 79109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635008501728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |