Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1407 230 7e-58 seq11467 125 2e-26 seq1898 123 8e-26 seq2348 122 3e-25 seq4170 118 3e-24 seq5301 111 5e-22 seq1031 107 6e-21 seq3092 100 9e-19 seq557 98.7 3e-18 seq11518 96.9 1e-17 seq1732 96.9 1e-17 seq6014 86.0 2e-14 seq4494 82.4 2e-13 seq109 78.8 3e-12 seq5911 75.2 3e-11 seq138 75.2 3e-11 >seq1407 Length=377872 Score = 230 bits (254), Expect = 7e-58 Identities = 377/540 (70%), Gaps = 60/540 (11%) Strand=Plus/Plus Query 2 TACTCATTCCAATTACAAGACCCAAA-AGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||| |||||||| | | | |||| ||||||| ||||| | ||||||||| Sbjct 211975 TACTCATTTCAATTACAGGGTCTTGACAGAGTCCTGTATTGTTATTTTTCATCACTACCT 212034 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| || |||| |||||||| || | |||| |||||||||||||||||||||||| || Sbjct 212035 ACCCAGGTTGGGAGTGGGTAATATGTGTGCCTACTGCCTTCCTTGGATGTGGTAGCCATT 212094 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||| ||||| ||||||| ||| || | || ||| | || | ||| Sbjct 212095 TCTCAGGCTCCCTCTCTGGAATTGAACCCTGATTATCC-TCACACGTGGTCACGACAGTA 212153 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||| | | |||||||| |||||||||||| |||| | ||||| | | | || Sbjct 212154 GGCACCGAGACTACCATCAAAAGTTGATAGGACAGATGATCGAATG---GGTTGTTGCCT 212210 Query 241 CAA----GGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGG-----AGC----- 284 ||| || || |||||| | | ||||| || ||||||| | ||| Sbjct 212211 CAATGTGGGGCAGGCGATTGGCCCAAGGTTATCTAGAGTCACCAAAGCTGCCAGCATCCG 212270 Query 285 CCC-------------GAAGGG----------CGTTGGTTTTTTATCTAATAAATACACC 321 ||| | |||| ||||| |||| |||| |||||| | Sbjct 212271 CCCTCTGGCTGGGGCTGGAGGGAGGCTGACCAGGTTGG-TTTTCATCTGATAAATGTAAG 212329 Query 322 CCT---TCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGG 371 | | ||| | ||||| || |||||||||| ||||||||||||||| | Sbjct 212330 CATCACTCCTGTGAAGGGGTCAGCACCCGTTTGCATGTATTACCTCTAGAATTACCACAG 212389 Query 372 TTATCCATGT-AGTAAGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCATT 426 ||||||| || || ||| | | |||| ||| |||||||||||||||||||||| Sbjct 212390 TTATCCAAGTAAGAGAGGAGCAAGTGACCAAAGGAACCATAACTGATTTAATGAGCCATT 212449 Query 427 CGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 ||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 212450 CGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAA 212509 >seq11467 Length=960013 Score = 125 bits (138), Expect = 2e-26 Identities = 98/112 (88%), Gaps = 5/112 (4%) Strand=Plus/Minus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452 |||| ||| ||||||||||||||||||||| ||| |||||||||| || ||| | Sbjct 322354 CAAAGGAACCATAACTGATTTAATGAGCCATATGCACTTTCACTGTACCAGCCATGC--A 322297 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 322296 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT-ACTACTGGCAG 322246 >seq1898 Length=311162 Score = 123 bits (136), Expect = 8e-26 Identities = 115/145 (79%), Gaps = 7/145 (5%) Strand=Plus/Minus Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-----ATCAAATAAACGATA 407 ||||||||||| ||| ||||||||| |||| | | | | | |||| |||| ||| Sbjct 151007 AGCTCTAGAATCACC--GGTTATCCAAGTAGGAGAGGAGTGAGTGACCAAAGAAACCATA 150950 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467 |||||||||||||||||||||||||||||||||| | | ||||||||||||||| Sbjct 150949 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCAT 150890 Query 468 GGCTTAATCTTTGAGACAAGCATAT 492 | |||||||| |||||||||||| Sbjct 150889 AGTTTAATCTTCCAGACAAGCATAT 150865 >seq2348 Length=273496 Score = 122 bits (134), Expect = 3e-25 Identities = 96/112 (86%), Gaps = 5/112 (4%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452 |||| ||| ||||||||||||||||||||| | ||||||||||||| | ||| | Sbjct 148666 CAAAGGAACCATAACTGATTTAATGAGCCATCCACAGTTTCACTGTACTGGCCATGC--A 148723 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||| ||||||||| || ||||||| Sbjct 148724 TACTTAGACATGCATGGCTTAATCTTTGAGATAAGCATATG-CTCCTGGCAG 148774 >seq4170 Length=150523 Score = 118 bits (130), Expect = 3e-24 Identities = 82/92 (89%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472 ||||||||||||||||||||||||||||| | | |||||||||||||||||||| Sbjct 144104 TTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTT 144163 Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||| |||||||||| Sbjct 144164 AATCTTTGAGACAAGCATATG-CTACTGGCAG 144194 >seq5301 Length=104175 Score = 111 bits (122), Expect = 5e-22 Identities = 94/111 (85%), Gaps = 5/111 (5%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTA 452 |||| ||| |||||||||||||||||||||| ||||||||||||| || ||| | Sbjct 84242 CAAAGGAACCGTAACTGATTTAATGAGCCATTCACAGTTTCACTGTACCAGCCATGC--A 84299 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 |||||||||| |||||| |||||||||||||| ||||| || ||||||||| Sbjct 84300 TACTTAGACAGGCATGGTTTAATCTTTGAGACGAGCATGTG-CTACTGGCA 84349 >seq1031 Length=436443 Score = 107 bits (118), Expect = 6e-21 Identities = 94/112 (84%), Gaps = 5/112 (4%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452 |||| ||| ||| ||||||||||||||||| | ||||||||||||| || || | Sbjct 420584 CAAAGGAACCATACCTGATTTAATGAGCCATCCACAGTTTCACTGTACCAGCCATGA--A 420641 Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| ||||||||||||||| |||| |||| Sbjct 420642 TACTTAGACATGCATGGCTTAATCTCTGAGACAAGCATATG-GTACTAGCAG 420692 >seq3092 Length=207244 Score = 100 bits (110), Expect = 9e-19 Identities = 83/98 (85%), Gaps = 5/98 (5%) Strand=Plus/Plus Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTATACTTAGACATGCA 466 ||||||||||||||||| |||||||| |||||| | ||| ||| ||||||||||| Sbjct 73140 CTGATTTAATGAGCCATCCGCAGTTTTACTGTACTGGCCATGCATAT--TTAGACATGCA 73197 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||| ||||||||||||| |||||||||| Sbjct 73198 TGGCCTAATCTTCCAGACAAGCATATG-CTACTGGCAG 73234 >seq557 Length=532491 Score = 98.7 bits (108), Expect = 3e-18 Identities = 127/168 (76%), Gaps = 12/168 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AG----GTACTATCAAA 398 |||||||||||||||||||||||||| | |||| | ||| | || | || |||| Sbjct 269444 GCATGTATTAGCTCTAGAATTACCACAGCTATCTAATTAGGAGAGGAGTGAACGGCCAAA 269385 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG-TATAGAT-TGCTTATACT 456 | | || | |||||| |||||||||||| ||||||| | || | ||| ||||| Sbjct 269384 GGAGCCATCAGTGATTTCATGAGCCATTCGGTGTTTCACCGCCCCAGCTGTGC--ATACT 269327 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||| || |||| | |||||||||||| |||||||||| Sbjct 269326 TAGACCCGCATGGATTCATCTCT--GACAAGCATATG-CTACTGGCAG 269282 >seq11518 Length=890782 Score = 96.9 bits (106), Expect = 1e-17 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || |||||||||||||||||||| |||||||||||| | | | |||||| || Sbjct 865695 ACCATAACTGATTTAATGAGCCACCTGCAGTTTCACTGCACTGGGCGTGCGTACTTAAAC 865754 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||| | |||| ||||| Sbjct 865755 ATGCCTGGCTTAATCTTTGAGACAAGCATACG-CTACAGGCAG 865796 >seq1732 Length=328546 Score = 96.9 bits (106), Expect = 1e-17 Identities = 84/103 (82%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461 || ||||| ||||||||||| || | ||||||||||||| | | ||||||||| Sbjct 292573 ACCATAACAGATTTAATGAGAAATCCACAGTTTCACTGTACCAGTCACGCGTACTTAGAC 292514 Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||| ||| ||||| Sbjct 292513 ATACATGGCTTAATCTTTGAGACAAGCATATG-TTACAGGCAG 292472 >seq6014 Length=81275 Score = 86.0 bits (94), Expect = 2e-14 Identities = 71/88 (81%), Gaps = 9/88 (10%) Strand=Plus/Minus Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464 |||||||||||||| | ||||| |||||||||||||| | |||||| ||| | Sbjct 37349 ATAACTGATTTAATTACCCATTGGCAGTTTCACTGTACA---------TACTTATACAGG 37299 Query 465 CATGGCTTAATCTTTGAGACAAGCATAT 492 | |||||||||||||||||||| ||||| Sbjct 37298 CGTGGCTTAATCTTTGAGACAAACATAT 37271 >seq4494 Length=136793 Score = 82.4 bits (90), Expect = 2e-13 Identities = 100/138 (72%), Gaps = 10/138 (7%) Strand=Plus/Minus Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT------ 108 |||||| || | ||| | || |||||||| | || |||||||||||||||| Sbjct 26938 CTACCTTCCTGGGTCAGAGATGAGTAATTTGTGAGCATGCTGCCTTCCTTGGAACCTCAA 26879 Query 109 ----GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164 ||||||||| ||||||||||||||||| | | || || || ||||| || ||| Sbjct 26878 AACAGTGGTAGCCATTTCTCAGGCTCCCTCTTTGAATTCAAATGCTGATTCCTTGTCACC 26819 Query 165 CGTTGATACCATGGTAGG 182 || | | |||||||||| Sbjct 26818 CGAGGTTGCCATGGTAGG 26801 >seq109 Length=684440 Score = 78.8 bits (86), Expect = 3e-12 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | | ||| || ||||| | ||||| ||||||||||||| Sbjct 625845 ACTCATTCCAATTACAGGGCATTGAAAAAGTCCTGTCTTGCTATTTTTTGTCACTACCTC 625904 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111 || || ||| |||||||| ||| | |||| |||| ||||| |||||| Sbjct 625905 CCTAGGTGAGGAGTGGGTAATATGCACACCTGTTGCCATCCTT-GATGTG 625953 >seq5911 Length=84065 Score = 75.2 bits (82), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 9/109 (8%) Strand=Plus/Minus Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG--ATTGCTTATACTTAG 459 || ||||||||| ||||||||||| ||||||| ||| || | ||| |||||||| Sbjct 6745 ACCATAACTGATATAATGAGCCATCTGCAGTTTTACTATACTGGCCATGC--ATACTTAG 6688 Query 460 ACATGCA----TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||| | || || ||| ||||||||||||| |||||||||| Sbjct 6687 ACATGCATACTTAGCATATGCTTCCAGACAAGCATATG-CTACTGGCAG 6640 >seq138 Length=672973 Score = 75.2 bits (82), Expect = 3e-11 Identities = 87/113 (77%), Gaps = 6/113 (5%) Strand=Plus/Plus Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTG--TCGGGATTGGGTAATT 83 ||||| |||||| ||||| || ||||| |||||| || || ||| ||||| || Sbjct 182510 AAAGAATCCTGTACTCTTATTTTTT-TCACT--CTCCCCCTGGATCAGGAGTGGGTCATC 182566 Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTC 136 || || |||||||||||||||| ||| ||| |||||||||| |||||||| Sbjct 182567 TGTTGGC-TGCTGCCTTCCTTGGACATGGGAGCTGTTTCTCAGGTTCCCTCTC 182618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510223117056