Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30]
11,711 sequences; 2,280,727,784 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1407 230 7e-58
seq11467 125 2e-26
seq1898 123 8e-26
seq2348 122 3e-25
seq4170 118 3e-24
seq5301 111 5e-22
seq1031 107 6e-21
seq3092 100 9e-19
seq557 98.7 3e-18
seq11518 96.9 1e-17
seq1732 96.9 1e-17
seq6014 86.0 2e-14
seq4494 82.4 2e-13
seq109 78.8 3e-12
seq5911 75.2 3e-11
seq138 75.2 3e-11
>seq1407
Length=377872
Score = 230 bits (254), Expect = 7e-58
Identities = 377/540 (70%), Gaps = 60/540 (11%)
Strand=Plus/Plus
Query 2 TACTCATTCCAATTACAAGACCCAAA-AGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||||| |||||||| | | | |||| ||||||| ||||| | |||||||||
Sbjct 211975 TACTCATTTCAATTACAGGGTCTTGACAGAGTCCTGTATTGTTATTTTTCATCACTACCT 212034
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| || |||| |||||||| || | |||| |||||||||||||||||||||||| ||
Sbjct 212035 ACCCAGGTTGGGAGTGGGTAATATGTGTGCCTACTGCCTTCCTTGGATGTGGTAGCCATT 212094
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||| ||||| ||||||| ||| || | || ||| | || | |||
Sbjct 212095 TCTCAGGCTCCCTCTCTGGAATTGAACCCTGATTATCC-TCACACGTGGTCACGACAGTA 212153
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||| | | |||||||| |||||||||||| |||| | ||||| | | | ||
Sbjct 212154 GGCACCGAGACTACCATCAAAAGTTGATAGGACAGATGATCGAATG---GGTTGTTGCCT 212210
Query 241 CAA----GGCCATGCGATT--CGTTAAGTTATTATGAATCACCAAGG-----AGC----- 284
||| || || |||||| | | ||||| || ||||||| | |||
Sbjct 212211 CAATGTGGGGCAGGCGATTGGCCCAAGGTTATCTAGAGTCACCAAAGCTGCCAGCATCCG 212270
Query 285 CCC-------------GAAGGG----------CGTTGGTTTTTTATCTAATAAATACACC 321
||| | |||| ||||| |||| |||| |||||| |
Sbjct 212271 CCCTCTGGCTGGGGCTGGAGGGAGGCTGACCAGGTTGG-TTTTCATCTGATAAATGTAAG 212329
Query 322 CCT---TCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGG 371
| | ||| | ||||| || |||||||||| ||||||||||||||| |
Sbjct 212330 CATCACTCCTGTGAAGGGGTCAGCACCCGTTTGCATGTATTACCTCTAGAATTACCACAG 212389
Query 372 TTATCCATGT-AGTAAGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCATT 426
||||||| || || ||| | | |||| ||| ||||||||||||||||||||||
Sbjct 212390 TTATCCAAGTAAGAGAGGAGCAAGTGACCAAAGGAACCATAACTGATTTAATGAGCCATT 212449
Query 427 CGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486
||||||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct 212450 CGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAA 212509
>seq11467
Length=960013
Score = 125 bits (138), Expect = 2e-26
Identities = 98/112 (88%), Gaps = 5/112 (4%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452
|||| ||| ||||||||||||||||||||| ||| |||||||||| || ||| |
Sbjct 322354 CAAAGGAACCATAACTGATTTAATGAGCCATATGCACTTTCACTGTACCAGCCATGC--A 322297
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 322296 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT-ACTACTGGCAG 322246
>seq1898
Length=311162
Score = 123 bits (136), Expect = 8e-26
Identities = 115/145 (79%), Gaps = 7/145 (5%)
Strand=Plus/Minus
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACT-----ATCAAATAAACGATA 407
||||||||||| ||| ||||||||| |||| | | | | | |||| |||| |||
Sbjct 151007 AGCTCTAGAATCACC--GGTTATCCAAGTAGGAGAGGAGTGAGTGACCAAAGAAACCATA 150950
Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCAT 467
|||||||||||||||||||||||||||||||||| | | |||||||||||||||
Sbjct 150949 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCAT 150890
Query 468 GGCTTAATCTTTGAGACAAGCATAT 492
| |||||||| ||||||||||||
Sbjct 150889 AGTTTAATCTTCCAGACAAGCATAT 150865
>seq2348
Length=273496
Score = 122 bits (134), Expect = 3e-25
Identities = 96/112 (86%), Gaps = 5/112 (4%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTA 452
|||| ||| ||||||||||||||||||||| | ||||||||||||| | ||| |
Sbjct 148666 CAAAGGAACCATAACTGATTTAATGAGCCATCCACAGTTTCACTGTACTGGCCATGC--A 148723
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||| ||||||||| || |||||||
Sbjct 148724 TACTTAGACATGCATGGCTTAATCTTTGAGATAAGCATATG-CTCCTGGCAG 148774
>seq4170
Length=150523
Score = 118 bits (130), Expect = 3e-24
Identities = 82/92 (89%), Gaps = 1/92 (1%)
Strand=Plus/Plus
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTT 472
||||||||||||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 144104 TTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTT 144163
Query 473 AATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||| ||||||||||
Sbjct 144164 AATCTTTGAGACAAGCATATG-CTACTGGCAG 144194
>seq5301
Length=104175
Score = 111 bits (122), Expect = 5e-22
Identities = 94/111 (85%), Gaps = 5/111 (5%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAG-ATTGCTTA 452
|||| ||| |||||||||||||||||||||| ||||||||||||| || ||| |
Sbjct 84242 CAAAGGAACCGTAACTGATTTAATGAGCCATTCACAGTTTCACTGTACCAGCCATGC--A 84299
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503
|||||||||| |||||| |||||||||||||| ||||| || |||||||||
Sbjct 84300 TACTTAGACAGGCATGGTTTAATCTTTGAGACGAGCATGTG-CTACTGGCA 84349
>seq1031
Length=436443
Score = 107 bits (118), Expect = 6e-21
Identities = 94/112 (84%), Gaps = 5/112 (4%)
Strand=Plus/Plus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA 452
|||| ||| ||| ||||||||||||||||| | ||||||||||||| || || |
Sbjct 420584 CAAAGGAACCATACCTGATTTAATGAGCCATCCACAGTTTCACTGTACCAGCCATGA--A 420641
Query 453 TACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct 420642 TACTTAGACATGCATGGCTTAATCTCTGAGACAAGCATATG-GTACTAGCAG 420692
>seq3092
Length=207244
Score = 100 bits (110), Expect = 9e-19
Identities = 83/98 (85%), Gaps = 5/98 (5%)
Strand=Plus/Plus
Query 409 CTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT--TGCTTATACTTAGACATGCA 466
||||||||||||||||| |||||||| |||||| | ||| ||| |||||||||||
Sbjct 73140 CTGATTTAATGAGCCATCCGCAGTTTTACTGTACTGGCCATGCATAT--TTAGACATGCA 73197
Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||| ||||||| ||||||||||||| ||||||||||
Sbjct 73198 TGGCCTAATCTTCCAGACAAGCATATG-CTACTGGCAG 73234
>seq557
Length=532491
Score = 98.7 bits (108), Expect = 3e-18
Identities = 127/168 (76%), Gaps = 12/168 (7%)
Strand=Plus/Minus
Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AG----GTACTATCAAA 398
|||||||||||||||||||||||||| | |||| | ||| | || | || ||||
Sbjct 269444 GCATGTATTAGCTCTAGAATTACCACAGCTATCTAATTAGGAGAGGAGTGAACGGCCAAA 269385
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTG-TATAGAT-TGCTTATACT 456
| | || | |||||| |||||||||||| ||||||| | || | ||| |||||
Sbjct 269384 GGAGCCATCAGTGATTTCATGAGCCATTCGGTGTTTCACCGCCCCAGCTGTGC--ATACT 269327
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||| |||||| || |||| | |||||||||||| ||||||||||
Sbjct 269326 TAGACCCGCATGGATTCATCTCT--GACAAGCATATG-CTACTGGCAG 269282
>seq11518
Length=890782
Score = 96.9 bits (106), Expect = 1e-17
Identities = 84/103 (82%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461
|| |||||||||||||||||||| |||||||||||| | | | |||||| ||
Sbjct 865695 ACCATAACTGATTTAATGAGCCACCTGCAGTTTCACTGCACTGGGCGTGCGTACTTAAAC 865754
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||| ||||||||||||||||||||||||| | |||| |||||
Sbjct 865755 ATGCCTGGCTTAATCTTTGAGACAAGCATACG-CTACAGGCAG 865796
>seq1732
Length=328546
Score = 96.9 bits (106), Expect = 1e-17
Identities = 84/103 (82%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGAC 461
|| ||||| ||||||||||| || | ||||||||||||| | | |||||||||
Sbjct 292573 ACCATAACAGATTTAATGAGAAATCCACAGTTTCACTGTACCAGTCACGCGTACTTAGAC 292514
Query 462 ATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|| ||||||||||||||||||||||||||||| ||| |||||
Sbjct 292513 ATACATGGCTTAATCTTTGAGACAAGCATATG-TTACAGGCAG 292472
>seq6014
Length=81275
Score = 86.0 bits (94), Expect = 2e-14
Identities = 71/88 (81%), Gaps = 9/88 (10%)
Strand=Plus/Minus
Query 405 ATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATG 464
|||||||||||||| | ||||| |||||||||||||| | |||||| ||| |
Sbjct 37349 ATAACTGATTTAATTACCCATTGGCAGTTTCACTGTACA---------TACTTATACAGG 37299
Query 465 CATGGCTTAATCTTTGAGACAAGCATAT 492
| |||||||||||||||||||| |||||
Sbjct 37298 CGTGGCTTAATCTTTGAGACAAACATAT 37271
>seq4494
Length=136793
Score = 82.4 bits (90), Expect = 2e-13
Identities = 100/138 (72%), Gaps = 10/138 (7%)
Strand=Plus/Minus
Query 55 CTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT------ 108
|||||| || | ||| | || |||||||| | || ||||||||||||||||
Sbjct 26938 CTACCTTCCTGGGTCAGAGATGAGTAATTTGTGAGCATGCTGCCTTCCTTGGAACCTCAA 26879
Query 109 ----GTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACC 164
||||||||| ||||||||||||||||| | | || || || ||||| || |||
Sbjct 26878 AACAGTGGTAGCCATTTCTCAGGCTCCCTCTTTGAATTCAAATGCTGATTCCTTGTCACC 26819
Query 165 CGTTGATACCATGGTAGG 182
|| | | ||||||||||
Sbjct 26818 CGAGGTTGCCATGGTAGG 26801
>seq109
Length=684440
Score = 78.8 bits (86), Expect = 3e-12
Identities = 85/110 (77%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | | ||| || ||||| | ||||| |||||||||||||
Sbjct 625845 ACTCATTCCAATTACAGGGCATTGAAAAAGTCCTGTCTTGCTATTTTTTGTCACTACCTC 625904
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTG 111
|| || ||| |||||||| ||| | |||| |||| ||||| ||||||
Sbjct 625905 CCTAGGTGAGGAGTGGGTAATATGCACACCTGTTGCCATCCTT-GATGTG 625953
>seq5911
Length=84065
Score = 75.2 bits (82), Expect = 3e-11
Identities = 84/109 (77%), Gaps = 9/109 (8%)
Strand=Plus/Minus
Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG--ATTGCTTATACTTAG 459
|| ||||||||| ||||||||||| ||||||| ||| || | ||| ||||||||
Sbjct 6745 ACCATAACTGATATAATGAGCCATCTGCAGTTTTACTATACTGGCCATGC--ATACTTAG 6688
Query 460 ACATGCA----TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||| | || || ||| ||||||||||||| ||||||||||
Sbjct 6687 ACATGCATACTTAGCATATGCTTCCAGACAAGCATATG-CTACTGGCAG 6640
>seq138
Length=672973
Score = 75.2 bits (82), Expect = 3e-11
Identities = 87/113 (77%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTG--TCGGGATTGGGTAATT 83
||||| |||||| ||||| || ||||| |||||| || || ||| ||||| ||
Sbjct 182510 AAAGAATCCTGTACTCTTATTTTTT-TCACT--CTCCCCCTGGATCAGGAGTGGGTCATC 182566
Query 84 TGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTC 136
|| || |||||||||||||||| ||| ||| |||||||||| ||||||||
Sbjct 182567 TGTTGGC-TGCTGCCTTCCTTGGACATGGGAGCTGTTTCTCAGGTTCCCTCTC 182618
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510223117056
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