Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Physeter_20catodon_20[refseq_20GCF_5F000472045.1_202013-09-30] 11,711 sequences; 2,280,727,784 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11472 183 2e-41 seq2631 178 1e-39 seq2642 107 2e-18 seq6223 95.1 1e-14 >seq11472 Length=944226 Score = 183 bits (202), Expect = 2e-41 Identities = 599/916 (65%), Gaps = 21/916 (2%) Strand=Plus/Minus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| || || |||| || || || || | || | || || ||||| || | Sbjct 784971 ATGAACCACTTCTGAAAGAAAACCCCCGCCGCTCTGTCATCTTTCCTATCGAATACCGTG 784912 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 ||||||||| | ||| || || || || |||||||| ||||| | |||||||| || Sbjct 784911 ATATTTGGCAGACGTAGAAGAAAGCTGAGGCTTCCTTTTGGACAGCTGAGGAGGTGGACC 784852 Query 61145 TGTCCAAAGACATGAATGACTGGGAG--CGTTTATCGAGCGGTGAACAACATTTCATTAA 61202 | ||||| ||||| | || |||| | | | | | || || | |||||| | Sbjct 784851 TTTCCAAGGACATTCAGCACCGGGAAGCCCTGAAGCCTGAGGAGAG--ATATTTCACTTC 784794 Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262 ||||| |||| |||| ||| || || || || || ||||| || || |||| || Sbjct 784793 GCATGTTCTGGCTTTCTCTGCGGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGCG 784734 Query 61263 -TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCA 61321 ||| || || || || || | | || || |||||||||||||||||||| |||||| Sbjct 784733 GTTTAGC-CAAGAAGTTCAGATTACAGAAGCCCGTTGTTTCTACGGCTTCCAAATTGCCG 784675 Query 61322 TGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGG 61381 |||| || || || || ||||| ||| | ||| | || || |||| | || Sbjct 784674 TGGAAAACACACATTCTGAAATGTAGAGTCTCCTCGTTGACACTCACATTAAAGATTCCA 784615 Query 61382 CGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGG 61441 ||| | ||| | ||||||||||||||||| || || || ||| ||| || | Sbjct 784614 GAGAAAGGGAATTTCTCTTCAATGCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAG 784555 Query 61442 ATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGC 61499 |||||||| | |||| | | |||| |||||| | || ||||| | || Sbjct 784554 ATTGGGCCGTGCGCCGGAT--CGGGGACAAAGAGGCTACGTACGGAGAACGTGTCGCAGC 784497 Query 61500 ATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAA 61559 ||||| | || || || | || | ||| || ||||| | || || ||| | || Sbjct 784496 CTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGTTCTTTTGCATCGATGTTCTGGCTCAA 784437 Query 61560 GAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGG 61618 ||||| ||||| |||||||| || || || ||| | | || || || | ||||||| Sbjct 784436 AAAACGAGGACTGATGCCCGGCCTCACATTTTCCAACGAACTTATTAGCA-GAGACGAGG 784378 Query 61619 GCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGG 61678 | | || ||||| ||||| || | ||| ||| | ||| | | || |||| Sbjct 784377 GTTTACACTGTGACTTTGCCTGCCTGATGTTCGAAC---ACCTGCTACACAAACCTTCGG 784321 Query 61679 AGGAGCGTGTGGGTGAGATTGTTCGTGAG-GCGGTAACTATCGAACAGGAATTTCTGACT 61737 || || | || | || | |||| || ||||| | || |||||||| | || || Sbjct 784320 AGCAGAGAGTCAAAG-GAATAATCGTCAGTGCGGTTAGGATAGAACAGGAGCTCCTCACG 784262 Query 61738 GACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAA 61797 || || ||| || | ||| || ||||| || | || ||| |||||| || ||| Sbjct 784261 GAGGCCCCGCCAGTGAAGCCCATTGGGATGAACTGCGCTCTGATGAAGCAGTACATCGAA 784202 Query 61798 TTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAAA 61855 || || || ||| | || || | | ||||| | | | | | | | || ||| Sbjct 784201 TTCGTGGCAGACAGACTTATGCTGGGGCTGGGTGTTGGCAAGGTTTTCAGAGTA--GAAA 784144 Query 61856 ACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAAC 61915 | ||| |||| || ||||| | ||||| ||||| || ||||| || || | ||||| Sbjct 784143 ATCCACTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTCTGAGAAGA 784084 Query 61916 GTGTAGGCGACTATCA 61931 | |||||||| ||||| Sbjct 784083 GAGTAGGCGAGTATCA 784068 >seq2631 Length=239737 Score = 178 bits (196), Expect = 1e-39 Identities = 601/917 (66%), Gaps = 27/917 (3%) Strand=Plus/Plus Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084 ||||||| || || |||| || || || || | || | || || ||||| || | Sbjct 170609 ATGAACCACTTCTGAAAGAAAACCCCCGCCGCTCTGTCATCTTTCCTATCGAATACCGTG 170668 Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144 ||||||||| | ||| || || || || |||||||||||||| | |||||||| || Sbjct 170669 ATATTTGGCAGACGTATAAGAAAGCTGAGGCTTCCTTCTGGACAGCTGAGGAGGTGGACC 170728 Query 61145 TGTCCAAAGACATGAATGACTGGG-AGCGTTTATCGAG-CGGTGAACA-ACATTTCATTA 61201 | ||||| ||||| | || ||| ||| | | || | | ||| | | |||||| | Sbjct 170729 TTTCCAAGGACATTCAGCACCGGGAAGCCCTGA---AGCCTGAGAAGAGATATTTCACTT 170785 Query 61202 AACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAAC 61261 |||||| |||| |||| ||| || || || || || ||||| || || |||| | Sbjct 170786 CACATGTTCTGGCTTTCTCTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 170845 Query 61262 -GTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCC 61320 | || || || || || || | | || || |||||||||||||||||||| |||||| Sbjct 170846 GGCTTAGC-CAAGAAGTTCAGATTACAGAAGCCCGTTGTTTCTACGGCTTCCAAATTGCC 170904 Query 61321 ATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGG 61380 |||| || || || || ||||| ||| | ||| | || || |||| | || Sbjct 170905 GTGGAAAACACACATTCTGAAATGTAGAGTCTCCTCGTTGACACTCACATTAAAGATTCC 170964 Query 61381 GCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCG 61440 ||| | ||| | ||||||| ||||||||| || || | || || ||| | Sbjct 170965 AGAGAAAGGGAATTTCTCTTCAATGTCATCGAGACAATGCCTG-TGTAAA---GAAGCCA 171020 Query 61441 GATTGGGCCTTCAATTGGATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGG 61498 ||||||||| | |||| | | |||| |||||| | || ||||| | | Sbjct 171021 GATTGGGCCGTGCGCCGGAT--CGGGGACAAAGAGGCTACGTACGGAGAACGTGTCGCAG 171078 Query 61499 CATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGA 61558 | ||||| | || || || | || | ||| || ||||| | || || ||| | | Sbjct 171079 CCTTTGCCGCAGTGGAAGGAATCTTCTCTTCTGGTTCTTTTGCATCGATGTTCTGGCTCA 171138 Query 61559 AGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAG 61617 | ||||| ||||| |||||||| || || || ||||| | || || || | |||||| Sbjct 171139 AAAAACGAGGACTGATGCCCGGCCTCACATTTTCCAATGAACTTATTAGCA-GAGACGAG 171197 Query 61618 GGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCG 61677 || | || ||||| ||||| | | ||| ||| | ||| | | || ||| Sbjct 171198 GGTTTACACTGTGACTTTGCCTGCCCGATGTTCGAAC---ACCTGCTACACAAACCTTCG 171254 Query 61678 GAGGAGCGTGTGGGTGAGATTGTTCGT-GAGGCGGTAACTATCGAACAGGAATTTCTGAC 61736 ||| || | || | || | |||| | ||||| | || |||||||| | || || Sbjct 171255 GAGCAGAGAGTCAAAG-GAATAATCGTCAACGCGGTTAGCATAGAACAGGAGCTCCTCAC 171313 Query 61737 TGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGA 61796 || || ||| || | ||| || ||||| || | || ||| |||||| || || Sbjct 171314 GGAGGCCCCGCCAGTGAAGCCCATTGGGATGAACTGCGCTCTGATGAAGCAGTACATCGA 171373 Query 61797 ATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTAT--GAAGCGGATCTATAATACGAAA 61854 ||| || || ||| | || || | || ||||| | | | | | | | || || Sbjct 171374 ATTCGTGGCAGACAGACTTATGCTGGAGCTGGGTGTTGGCAAGGTTTTCAGAGTA--GAA 171431 Query 61855 AACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAA 61914 || ||| |||| || ||||| | ||||| ||||| || ||||| || || | ||||| Sbjct 171432 AATCCACTTGACTTTATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTCTGAGAAG 171491 Query 61915 CGTGTAGGCGACTATCA 61931 | |||||||| ||||| Sbjct 171492 AGAGTAGGCGAGTATCA 171508 >seq2642 Length=239306 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| |||||||| || ||||| || || || | ||||| || Sbjct 96805 GGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCCTAGGTTCTGCTG 96746 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | ||||||||| || || ||||| || Sbjct 96745 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACCTGTCTCTGTCTG 96686 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 96685 AGACTCAATGATGGCATACCAAAG 96662 >seq6223 Length=75078 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | ||||| || |||||||| ||||| || ||| ||| || ||| Sbjct 18030 CAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAAAAT 18089 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 18090 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 18136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397511255989040