Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq139839 174 2e-41 seq63206 174 2e-41 seq141397 138 2e-30 seq128136 122 1e-25 seq177061 77.0 5e-12 >seq139839 Length=20153 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 11108 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 11165 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 11166 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 11225 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 11226 ACCCGCGCCTGCCGGCGGAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 11285 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 11286 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 11338 >seq63206 Length=2332 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 2124 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 2067 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 2066 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 2007 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 2006 ACCCGCGCCTGCCGGCGGAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 1947 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1946 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1894 >seq141397 Length=5529 Score = 138 bits (152), Expect = 2e-30 Identities = 174/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||| |||||||||| || ||||||| | ||| ||||| || |||||| |||||| | Sbjct 1730 GTACAAGGGGCAGGGACTTAATCAACGCAACCTT-ATGACCTGCACTTACTGGGAATT-C 1673 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | || || ||||||| | |||| ||||| || ||||| | || Sbjct 1672 CTCATTCATGAAGAATAATTGCATTCCCGGATCCTCATCATGAATGGGCTTCAACGGGTT 1613 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| |||| ||| | || || ||| ||||||||| |||||||| Sbjct 1612 ACCCGCACCTGCCGGCAGAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGTGCGCGTGCA 1553 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| |||||||||||||||||||||||||| || || ||||| || ||||| Sbjct 1552 GCCCCGAACATCTAAGGGCATCACAGACCTGCTAATG-CTCAATCTCAGGTGGC 1500 >seq128136 Length=5260 Score = 122 bits (134), Expect = 1e-25 Identities = 121/152 (80%), Gaps = 5/152 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||||| ||||| | |||| || |||| |||||||||||| ||| | Sbjct 553 GTACAAAGGGAAGGGACGTGATCAACACAAGCT-GACGACTTGCGCTTACTAGGGATTGC 495 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||| ||| | ||| ||| ||||||| || ||||| | | ||| | |||||| Sbjct 494 -TCGTTGAAGAGCAATAGTTGAAATACTCTATCCACAGCACGACGGAGTTTAACAAGATT 436 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCG 151 || ||||||| |||| ||| ||| | ||||| Sbjct 435 ACTCGGACCTCTCGGACAA--TGAAACACTCG 406 >seq177061 Length=14965 Score = 77.0 bits (84), Expect = 5e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 159 CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 |||| || |||||| | | ||||||| | |||||||||||||| ||||||||| ||||| Sbjct 1357 CATCCGTTTAGCGCACATACGGCCCACAGCATCTAAGGGCATCGCAGACCTGTCCTTGCC 1298 Query 219 TCAAACTTCC 228 || ||||||| Sbjct 1297 TCCAACTTCC 1288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 750707633715