Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq129355 138 6e-31 seq63206 98.7 6e-19 seq165265 96.9 2e-18 seq169253 80.6 1e-13 >seq129355 Length=2798 Score = 138 bits (152), Expect = 6e-31 Identities = 89/96 (93%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 22 TCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATAGTTT 81 |||||||||||||| || ||||||| |||||| || ||||||||||||||||||||||| Sbjct 1220 TCGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTCCGATCCCTAGTCGGCATAGTTT 1162 Query 82 ACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | |||||||||||||||||||||||||||||||||| Sbjct 1161 ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 1126 >seq63206 Length=2332 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 1590 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1531 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||| | |||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 1530 CATCGCCGGTCGGCATCGTTTAGGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1474 >seq165265 Length=2716 Score = 96.9 bits (106), Expect = 2e-18 Identities = 69/78 (88%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || ||||| ||||||||||||||||||||||||| || ||||||| |||||| || || Sbjct 2704 GAGCCCAAGCACTTTGATTTCTCGTAAGGTGCCGAACGGGTCAAAA-AATAACACCGTCC 2646 Query 61 GATCCCTAGTCGGCATAG 78 |||||||||||||||||| Sbjct 2645 GATCCCTAGTCGGCATAG 2628 >seq169253 Length=3763 Score = 80.6 bits (88), Expect = 1e-13 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Minus Query 71 CGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 75 CGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277936983390