Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq44643 221 3e-55 >seq44643 Length=1967 Score = 221 bits (244), Expect = 3e-55 Identities = 256/353 (73%), Gaps = 27/353 (8%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAA------ 64 ||||||| | |||||||||| |||||||||||||||| ||||| |||| Sbjct 195 GAATAAGTATCGGCTAACTATGTGCCAGCAGCCGCGGGAATACATAGGNNNNNNNNNNNN 254 Query 65 --------------------GCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCG 104 |||||| |||| ||||||||||||||||| ||||||||| Sbjct 255 NNNNNNNNNNNNNNNNNNNNGCGTTATCCGGATTTACTGGGCGTAAAGCGAGCGCAGGCG 314 Query 105 GTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCA 164 | | || ||| | ||||| |||| | ||||||| | || ||||| | |||||| Sbjct 315 GATTTGCAAGTCTGGTGTTAAATACTGTTGCTTAACGATAGTAT-GCATTGGAAACTGCA 373 Query 165 CGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATAT 224 | ||||||| | || | | ||||| |||| ||| ||| ||| ||||||||||||| Sbjct 374 AGTCTAGAGTATAGTAGGGAGTTTTGGAACTCCATGTGGAGCGGTGGAATGCGTAGATAT 433 Query 225 GTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAA 284 |||| |||||||| |||||||||| | | || || |||||||||| | || |||| Sbjct 434 ATGGAAGAACACCAGTGGCGAAGGCGAAAACTTAGGCTATCACTGACGCTTAGGCTCGAA 493 Query 285 AGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 || |||||||||||| ||||||||||||||| ||||||||| || |||||||| Sbjct 494 AGTGTGGGGAGCAAATAGGATTAGATACCCTAGTAGTCCACACCGTAAACGAT 546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287312236704