Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq34986 105 2e-20 seq148349 75.2 3e-11 >seq34986 Length=1497 Score = 105 bits (116), Expect = 2e-20 Identities = 108/140 (77%), Gaps = 2/140 (1%) Strand=Plus/Plus Query 139 CGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAG--CTAACCCCATCAATT 196 ||||||||||| ||| |||||||| |||| |||||| || ||||| | | || Sbjct 682 CGGCCGCCGTTCACCAGGGCTTCGGTCAAAAGCTTCAGATTGCTCCTAACTTCCTTCCTT 741 Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 ||||||||||||| ||||||| ||||| || ||||| || ||| || || ||| || | Sbjct 742 AACCTTCCGGCACTGGGCAGGTGTCACCCCATATACATCATCTTGCGATTTAGCATAGAG 801 Query 257 CTGTGTTTTTAATAAACAGT 276 |||||||||| |||||||| Sbjct 802 CTGTGTTTTTGTTAAACAGT 821 >seq148349 Length=1099 Score = 75.2 bits (82), Expect = 3e-11 Identities = 44/46 (96%), Gaps = 0/46 (0%) Strand=Plus/Plus Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACC 226 ||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1054 GCTGACCCCATCAATTAACCTTCCAGCACCGGGCAGGCGTCACACC 1099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1258563328192