Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq146406 351 2e-94
seq8831 246 5e-63
seq65170 196 8e-48
seq95040 185 1e-44
seq116500 89.7 9e-16
>seq146406
Length=1016
Score = 351 bits (388), Expect = 2e-94
Identities = 255/294 (87%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 831 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 772
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 771 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 712
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 711 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 652
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 651 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 592
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 591 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 538
>seq8831
Length=29926
Score = 246 bits (272), Expect = 5e-63
Identities = 212/261 (81%), Gaps = 1/261 (0%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
|||||| |||||||||||| |||||||| || | |||||||||||||||| |||||||||
Sbjct 27947 ATCAGTGGGGTAAAACTAATCTGTCTCACGATGATCTAAACCCAGCTCACATTCCCTATT 27888
Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152
||||| ||||||||| || |||| || ||||||||| ||||||||||| || |||
Sbjct 27887 AGTGGATGAACAATCTAATGCTTGGTGAGTTCTGCTTCACAATGATAGGAAGGACCAACA 27828
Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212
|||||||||||||||||||| || |||||||| ||| || |||||||||||||||||||
Sbjct 27827 TCGAAGGATCAAAAAGCAACATCCCTATGAACTCTTAGCCCCCACAAGCCAGTTATCCCT 27768
Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272
||||||||||||||| | ||||| | | ||| | | | | ||| || | |||||
Sbjct 27767 GTGGTAACTTTTCTGACTCCTCTTG-TTTAAACTAAAAAAGTCAGAAGAATTGCAAGGCC 27709
Query 273 ACACTTTCATGGTTTGTATTC 293
| |||||| || |||||||
Sbjct 27708 CCGCTTTCACAGTCTGTATTC 27688
>seq65170
Length=18684
Score = 196 bits (216), Expect = 8e-48
Identities = 168/205 (82%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATG-ACGGTCTAAACCCAGCTCACGTTCCCT 89
|||||||||||| ||| ||||||||| || |||| |||| |||| |||| ||||||
Sbjct 9247 TCATCAGTAGGGCAAAGTTAACCTGTCCCAACTACGGCCTAATCCCAAATCACATTCCCT 9306
Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149
|||||||| ||||||||||| |||| |||| ||||||| |||||| |||| ||
Sbjct 9307 ATTAGTGGACGAACAATCCAATGCTTGATGAATCCTGCTTCACAATGATAATAAGAACCA 9366
Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
|||||||||||||| |||||||| || |||||||| |||| |||| |||||||||||
Sbjct 9367 ACATCGAAGGATCACAAAGCAACCTCACTATGAACATGTGGCCACCAC-AGCCAGTTATC 9425
Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234
||||||||||||||||||| ||||
Sbjct 9426 CCTGTGGTAACTTTTCTGGTGCCTC 9450
>seq95040
Length=30822
Score = 185 bits (204), Expect = 1e-44
Identities = 165/207 (80%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97
|| |||||||||||| ||| ||||||| ||| ||| |||| ||| ||||||||| |||
Sbjct 30257 TAAGGTAAAACTAACGTGTTTCATGACAGTCAAAAGCCAGTGCACTTTCCCTATTTATGG 30198
Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157
|||||||||||||| | ||||| ||| |||||||||||||| || || |||
Sbjct 30197 GTGAACAATCCAACATTAGGTAAATTCCATTTCACAATGATAGGAAGAGCTGATATTGAA 30138
Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217
|||| || ||||||| || ||| ||| || ||| ||||||| |||||||||||| |||
Sbjct 30137 GGATTAACAAGCAACATCTCTAGCAACACTGGGCCACCACAAGGCAGTTATCCCTGAGGT 30078
Query 218 AACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||| ||| | |||
Sbjct 30077 AACTTTTCTGGCACCTCCAGCTTAAAA 30051
>seq116500
Length=1857
Score = 89.7 bits (98), Expect = 9e-16
Identities = 51/52 (98%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 244 ATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295
|| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 702 ATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 753
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 852884285856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |