Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq146406 351 2e-94 seq8831 246 5e-63 seq65170 196 8e-48 seq95040 185 1e-44 seq116500 89.7 9e-16 >seq146406 Length=1016 Score = 351 bits (388), Expect = 2e-94 Identities = 255/294 (87%), Gaps = 1/294 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || ||||||||||||||||||||||||||||| Sbjct 831 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 772 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 771 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 712 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 711 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 652 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct 651 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 592 Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293 | ||| | | || | |||||||| ||||| | |||||| ||| ||||||| Sbjct 591 TAAAACCCCAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 538 >seq8831 Length=29926 Score = 246 bits (272), Expect = 5e-63 Identities = 212/261 (81%), Gaps = 1/261 (0%) Strand=Plus/Minus Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92 |||||| |||||||||||| |||||||| || | |||||||||||||||| ||||||||| Sbjct 27947 ATCAGTGGGGTAAAACTAATCTGTCTCACGATGATCTAAACCCAGCTCACATTCCCTATT 27888 Query 93 AGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACA 152 ||||| ||||||||| || |||| || ||||||||| ||||||||||| || ||| Sbjct 27887 AGTGGATGAACAATCTAATGCTTGGTGAGTTCTGCTTCACAATGATAGGAAGGACCAACA 27828 Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 |||||||||||||||||||| || |||||||| ||| || ||||||||||||||||||| Sbjct 27827 TCGAAGGATCAAAAAGCAACATCCCTATGAACTCTTAGCCCCCACAAGCCAGTTATCCCT 27768 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| | ||||| | | ||| | | | | ||| || | ||||| Sbjct 27767 GTGGTAACTTTTCTGACTCCTCTTG-TTTAAACTAAAAAAGTCAGAAGAATTGCAAGGCC 27709 Query 273 ACACTTTCATGGTTTGTATTC 293 | |||||| || ||||||| Sbjct 27708 CCGCTTTCACAGTCTGTATTC 27688 >seq65170 Length=18684 Score = 196 bits (216), Expect = 8e-48 Identities = 168/205 (82%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATG-ACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||||||| ||| ||||||||| || |||| |||| |||| |||| |||||| Sbjct 9247 TCATCAGTAGGGCAAAGTTAACCTGTCCCAACTACGGCCTAATCCCAAATCACATTCCCT 9306 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 |||||||| ||||||||||| |||| |||| ||||||| |||||| |||| || Sbjct 9307 ATTAGTGGACGAACAATCCAATGCTTGATGAATCCTGCTTCACAATGATAATAAGAACCA 9366 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||| |||||||| || |||||||| |||| |||| ||||||||||| Sbjct 9367 ACATCGAAGGATCACAAAGCAACCTCACTATGAACATGTGGCCACCAC-AGCCAGTTATC 9425 Query 210 CCTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||||||||| |||| Sbjct 9426 CCTGTGGTAACTTTTCTGGTGCCTC 9450 >seq95040 Length=30822 Score = 185 bits (204), Expect = 1e-44 Identities = 165/207 (80%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 38 TAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGG 97 || |||||||||||| ||| ||||||| ||| ||| |||| ||| ||||||||| ||| Sbjct 30257 TAAGGTAAAACTAACGTGTTTCATGACAGTCAAAAGCCAGTGCACTTTCCCTATTTATGG 30198 Query 98 GTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAA 157 |||||||||||||| | ||||| ||| |||||||||||||| || || ||| Sbjct 30197 GTGAACAATCCAACATTAGGTAAATTCCATTTCACAATGATAGGAAGAGCTGATATTGAA 30138 Query 158 GGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGT 217 |||| || ||||||| || ||| ||| || ||| ||||||| |||||||||||| ||| Sbjct 30137 GGATTAACAAGCAACATCTCTAGCAACACTGGGCCACCACAAGGCAGTTATCCCTGAGGT 30078 Query 218 AACTTTTCTGGCACCTCTAGCCTCAAA 244 ||||||||||||||||| ||| | ||| Sbjct 30077 AACTTTTCTGGCACCTCCAGCTTAAAA 30051 >seq116500 Length=1857 Score = 89.7 bits (98), Expect = 9e-16 Identities = 51/52 (98%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 244 ATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 || ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 702 ATGTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852884285856