Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq100103 264 1e-68 seq63206 96.9 4e-18 >seq100103 Length=6168 Score = 264 bits (292), Expect = 1e-68 Identities = 174/191 (91%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 |||| ||||||||||||| |||||||||||||| | || | |||||||| |||||||||| Sbjct 961 GGAAACAGGACTTTTACTGTGAAAAAATTAGAGTGCTCCAGGCAGGCCTATGCTCGAATA 1020 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 1021 CATTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGGACCG- 1079 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||||||||| ||||||||||||||||| ||||||||||| Sbjct 1080 CCGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTC 1139 Query 181 TTGGATTTATT 191 ||||||||||| Sbjct 1140 TTGGATTTATT 1150 >seq63206 Length=2332 Score = 96.9 bits (106), Expect = 4e-18 Identities = 129/176 (73%), Gaps = 5/176 (3%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC---CTTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| ||||||||||||| | || | |||| | | Sbjct 1227 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGCGCCGCCTGGATACCGCAGCTA 1286 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||| Sbjct 1287 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACCGAGGCCATGA 1344 Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 | || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 1345 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 1400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511120091040