Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq63206 370 3e-100
seq9836 163 9e-38
seq31925 93.3 1e-16
seq117059 87.8 5e-15
seq85711 84.2 7e-14
seq99738 78.8 3e-12
>seq63206
Length=2332
Score = 370 bits (410), Expect = 3e-100
Identities = 415/555 (75%), Gaps = 55/555 (10%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||||||||||||| || | || | |||||| |||| || ||||| | |||||||||||
Sbjct 994 ACTCATTCCAATTCCAGGGCCTCGAAAGAGTCCTGGATTGTTATTTTTCGTCACTACCTC 935
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 934 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 875
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||
Sbjct 874 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 815
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241
|| |||||||||||||||||||||||||| || ||||| | |||||| | |
Sbjct 814 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 755
Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCC----- 286
|| | |||||| | | ||||| || ||||||| || ||||
Sbjct 754 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 695
Query 287 ---------------------CGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325
|| | | ||||| |||| |||| |||||| ||| | |
Sbjct 694 CCGGCCGGGGCCGGGGGGAGGCGGACCGGGTTGG-TTTTGATCTGATAAATGCACGCGTC 636
Query 326 CC----------GAAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374
|| | ||||| | | |||||||||||||||||||||||||| ||||
Sbjct 635 CCCCCCGCGAGGGGGGTCGGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTA 576
Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429
|||| |||| | || | | | |||| ||| |||||||||||||||||||||||||
Sbjct 575 TCCAAGTAGGAGAGGGGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGC 516
Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489
|||||||||||| | | |||||||||||||||||||||||||||||||||||||
Sbjct 515 AGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 456
Query 490 TATGACTACTGGCAG 504
|||| ||||||||||
Sbjct 455 TATG-CTACTGGCAG 442
>seq9836
Length=11180
Score = 163 bits (180), Expect = 9e-38
Identities = 171/225 (76%), Gaps = 11/225 (5%)
Strand=Plus/Plus
Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
||| |||||||||||| | | |||||| ||||||| ||||| | ||||||||||
Sbjct 1557 ACTTATTCCAATTACAGGGCATTGAAAGAGACCTGTATTGTTATTTTTCATCACTACCTC 1616
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|| | | ||| ||||||||||||| |||||||||||||||||||||||||| | ||||
Sbjct 1617 CCTGGGATAGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAACTGTTT 1676
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
|||||||||||||||| ||| ||||||| ||| || || || |||||||
Sbjct 1677 CTCAGGCTCCCTCTCCAGAAGGGAACCCTGATTACC----------TGCAACTATGGTAG 1726
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226
|| |||| || |||||||| ||||||||| || |||||
Sbjct 1727 GCATGGTGACTACAATTGAAAGTTGGTAGGGCAGATGTTCGAATG 1771
>seq31925
Length=14049
Score = 93.3 bits (102), Expect = 1e-16
Identities = 77/94 (82%), Gaps = 0/94 (0%)
Strand=Plus/Minus
Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186
|||||||||| ||||||||||||||||||||| ||| || | ||||||||||||
Sbjct 6207 GCTCCCTCTCAGGAATCGAACCCTAATTCCCCACCACCTGTGGTCACCATGGTAGGCATG 6148
Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220
||||||| |||||||||||||||||| |||
Sbjct 6147 GCAACTACCATTGAAAGTTGATAGGGCAGATATT 6114
>seq117059
Length=10523
Score = 87.8 bits (96), Expect = 5e-15
Identities = 113/154 (73%), Gaps = 4/154 (3%)
Strand=Plus/Minus
Query 5 TCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63
|||||||||||||| || | |||| ||| || |||| | ||| | |||| | ||
Sbjct 340 TCATTCCAATTACAGGATCTCAAAGGAGTCCAGTAT---TGTTTTTCACCACTGCTGTCC 284
Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 123
|| |||| | ||||||||||| ||| |||||||||||||||| || ||| || || |
Sbjct 283 CGAGTCGTAAGTGGGTAATTTGTGCGTCTGCTGCCTTCCTTGGTTGGAATAGTCGATTAT 224
Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157
|||||| ||| | ||| | |||| ||||||
Sbjct 223 TAGGCTCTCTCCACAGAACCAAACCTGGATTCCC 190
>seq85711
Length=22496
Score = 84.2 bits (92), Expect = 7e-14
Identities = 51/53 (96%), Gaps = 1/53 (2%)
Strand=Plus/Plus
Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 13718 ATACCTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 13769
>seq99738
Length=35279
Score = 78.8 bits (86), Expect = 3e-12
Identities = 86/112 (77%), Gaps = 2/112 (2%)
Strand=Plus/Minus
Query 5 TCATTCCAATTACAAGAC-CCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63
|||||||||||||| ||| |||||| |||||| ||||| ||||||| ||||| |
Sbjct 23811 TCATTCCAATTACAGGACATTGAAAGAGTCCTGTACTGTTATTTTTTGTCACCACCTCTC 23752
Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115
| |||| || |||||||||| | |||| |||| |||||||| || |||
Sbjct 23751 CATGTCAAGA-GGGGTAATTTGTGTACCTGTTGCCATCCTTGGACATGATAG 23701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1507720535296
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |