Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq63206 370 3e-100 seq9836 163 9e-38 seq31925 93.3 1e-16 seq117059 87.8 5e-15 seq85711 84.2 7e-14 seq99738 78.8 3e-12 >seq63206 Length=2332 Score = 370 bits (410), Expect = 3e-100 Identities = 415/555 (75%), Gaps = 55/555 (10%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||||||| || | || | |||||| |||| || ||||| | ||||||||||| Sbjct 994 ACTCATTCCAATTCCAGGGCCTCGAAAGAGTCCTGGATTGTTATTTTTCGTCACTACCTC 935 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 934 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 875 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 874 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 815 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 814 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 755 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCCC----- 286 || | |||||| | | ||||| || ||||||| || |||| Sbjct 754 GGGGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCGCCCC 695 Query 287 ---------------------CGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325 || | | ||||| |||| |||| |||||| ||| | | Sbjct 694 CCGGCCGGGGCCGGGGGGAGGCGGACCGGGTTGG-TTTTGATCTGATAAATGCACGCGTC 636 Query 326 CC----------GAAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 || | ||||| | | |||||||||||||||||||||||||| |||| Sbjct 635 CCCCCCGCGAGGGGGGTCGGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTA 576 Query 375 TCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGC 429 |||| |||| | || | | | |||| ||| ||||||||||||||||||||||||| Sbjct 575 TCCAAGTAGGAGAGGGGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGC 516 Query 430 AGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 489 |||||||||||| | | ||||||||||||||||||||||||||||||||||||| Sbjct 515 AGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCA 456 Query 490 TATGACTACTGGCAG 504 |||| |||||||||| Sbjct 455 TATG-CTACTGGCAG 442 >seq9836 Length=11180 Score = 163 bits (180), Expect = 9e-38 Identities = 171/225 (76%), Gaps = 11/225 (5%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACCCA-AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||| |||||||||||| | | |||||| ||||||| ||||| | |||||||||| Sbjct 1557 ACTTATTCCAATTACAGGGCATTGAAAGAGACCTGTATTGTTATTTTTCATCACTACCTC 1616 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 || | | ||| ||||||||||||| |||||||||||||||||||||||||| | |||| Sbjct 1617 CCTGGGATAGGAGTGGGTAATTTGCGTGCCTGCTGCCTTCCTTGGATGTGGTAACTGTTT 1676 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 |||||||||||||||| ||| ||||||| ||| || || || ||||||| Sbjct 1677 CTCAGGCTCCCTCTCCAGAAGGGAACCCTGATTACC----------TGCAACTATGGTAG 1726 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATG 226 || |||| || |||||||| ||||||||| || ||||| Sbjct 1727 GCATGGTGACTACAATTGAAAGTTGGTAGGGCAGATGTTCGAATG 1771 >seq31925 Length=14049 Score = 93.3 bits (102), Expect = 1e-16 Identities = 77/94 (82%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 127 GCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCAC 186 |||||||||| ||||||||||||||||||||| ||| || | |||||||||||| Sbjct 6207 GCTCCCTCTCAGGAATCGAACCCTAATTCCCCACCACCTGTGGTCACCATGGTAGGCATG 6148 Query 187 TATCCTACCATCGAAAGTTGATAGGGCAGAAATT 220 ||||||| |||||||||||||||||| ||| Sbjct 6147 GCAACTACCATTGAAAGTTGATAGGGCAGATATT 6114 >seq117059 Length=10523 Score = 87.8 bits (96), Expect = 5e-15 Identities = 113/154 (73%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 |||||||||||||| || | |||| ||| || |||| | ||| | |||| | || Sbjct 340 TCATTCCAATTACAGGATCTCAAAGGAGTCCAGTAT---TGTTTTTCACCACTGCTGTCC 284 Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 123 || |||| | ||||||||||| ||| |||||||||||||||| || ||| || || | Sbjct 283 CGAGTCGTAAGTGGGTAATTTGTGCGTCTGCTGCCTTCCTTGGTTGGAATAGTCGATTAT 224 Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCC 157 |||||| ||| | ||| | |||| |||||| Sbjct 223 TAGGCTCTCTCCACAGAACCAAACCTGGATTCCC 190 >seq85711 Length=22496 Score = 84.2 bits (92), Expect = 7e-14 Identities = 51/53 (96%), Gaps = 1/53 (2%) Strand=Plus/Plus Query 452 ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 13718 ATACCTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 13769 >seq99738 Length=35279 Score = 78.8 bits (86), Expect = 3e-12 Identities = 86/112 (77%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGAC-CCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 |||||||||||||| ||| |||||| |||||| ||||| ||||||| ||||| | Sbjct 23811 TCATTCCAATTACAGGACATTGAAAGAGTCCTGTACTGTTATTTTTTGTCACCACCTCTC 23752 Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAG 115 | |||| || |||||||||| | |||| |||| |||||||| || ||| Sbjct 23751 CATGTCAAGA-GGGGTAATTTGTGTACCTGTTGCCATCCTTGGACATGATAG 23701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1507720535296