Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_007189.1
Length=6907
Score E
Sequences producing significant alignments: (Bits) Value
seq131851 253 9e-64
>seq131851
Length=40801
Score = 253 bits (280), Expect = 9e-64
Identities = 304/403 (75%), Gaps = 20/403 (5%)
Strand=Plus/Minus
Query 1957 AAACTCGCCACGGTGGTCATGGCGCTATGCCTGTTCGTGGGTGCCGCCCTACCCCACGAC 2016
|| |||||| | || |||||||| |||||| || || |||||| |||||| |
Sbjct 26599 AAGCTCGCCGCCACGGCAATGGCGCTGTGCCTGGCTGTTGGATTCGCCCTGCCCCACAAG 26540
Query 2017 GTGCAGGCTATGCCG---CAGGCT--GGTAATGCCTTGCACGATATACATTATGCGAAAT 2071
| ||||| |||| |||||| | || || ||| ||||||||||||| |||
Sbjct 26539 GCTCAGGCC--GCCGTAGCAGGCTTTGACAAGTCC--GCAGTCTATACATTATGCGCAAT 26484
Query 2072 CACGTATCCG-CCGGATCTGGGCCTTTGTTGGGTCCGCGTGGCAATGGCTGGGCCTCTGG 2130
| || | || |||| || || || || || || |||||||||||||||||||||
Sbjct 26483 GCAATGTCTGGCCTGATCCGG---TTCGTGGGCTCGGCTTGGCAATGGCTGGGCCTCTGG 26427
Query 2131 CTCGGCTC-TTGCCTGCGTCCTCAGTCCCCGGCCAAGGATGAGATCGCGGCATGATTGAG 2189
|||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 26426 CTCGGCTCCTTGCCTGCGCCCTCAGTCCCCGGCCAAGGATGAGATCGCGGCATGGTTGAG 26367
Query 2190 TTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCGGTTTTTCTTTCCTCGGT 2249
|| |||||||||||||||||||||||||||||||||||||| ||||| |||| |||
Sbjct 26366 TTCGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCTGGTTTCGGCTTCCAAGGT 26307
Query 2250 GATCGTCTGATCACGCCCGAAGGCCGCGAGCT---ACTTCCTGAAGATCTGGCCTGGCTG 2306
| | || |||| || ||||| | | |||| || |||| ||| |||||||| |
Sbjct 26306 GGGCACATGTTCACTCCTGAAGGTCACCAGCTGGAAC--CCTG-CGATATGGCCTGGTGG 26250
Query 2307 TCACTCACCGCCTGCCAAGCGCAGGAATGGCGCCGGATGATGG 2349
|| || ||| | | |||| ||||||||| || |||||||
Sbjct 26249 TCCCTGACCTGCAACATTGCGCGGGAATGGCGACGAATGATGG 26207
Score = 203 bits (224), Expect = 1e-48
Identities = 154/181 (85%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 2055 TATACATTATGCGAAATCACGTATCCGCCGGATCTGGGCCTTTGTTGGGTCCGCGTGGCA 2114
|||||||||||| ||||| ||| |||||| ||||||||||||||||| ||||| |||||
Sbjct 23806 TATACATTATGCAAAATCTCGTCCCCGCCGAATCTGGGCCTTTGTTGGCTCCGCATGGCA 23747
Query 2115 ATGGCTGGGCCTCTGGCTCGGCTCTTGCCTGCGTCCTCAGTC--CCCGGCCAAGGATGAG 2172
|||||||||||||||||||||| | ||||| || ||| || | ||| ||| | |||||
Sbjct 23746 ATGGCTGGGCCTCTGGCTCGGCCCCTGCCTCCGCCCTGAGACCGCCCAGCCTTGTATGAG 23687
Query 2173 ATCGCGGCATGATTGAGTTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCG 2232
||||||||||||| | ||| ||||||||||||||||| ||| ||||||||| | |||| |
Sbjct 23686 ATCGCGGCATGATCGTGTTCGACCCGCACCACCGTATTGACCTGACCGGCCTTCGGGCGG 23627
Query 2233 G 2233
|
Sbjct 23626 G 23626
Score = 170 bits (188), Expect = 8e-39
Identities = 216/296 (73%), Gaps = 1/296 (0%)
Strand=Plus/Minus
Query 2054 ATATACATTATGCGAAATCACGTATCCGCCGGATCTGGGCCTTTGTTGGGTCCGCGTGGC 2113
|||||||||||||||||| ||||| | || || || || || || ||||||||||
Sbjct 34475 ATATACATTATGCGAAATGCTGTATCAGTCGTTGGTGAGC-TTCGTCGGCTCCGCGTGGC 34417
Query 2114 AATGGCTGGGCCTCTGGCTCGGCTCTTGCCTGCGTCCTCAGTCCCCGGCCAAGGATGAGA 2173
|||||||| | |||||||| ||||||||||| | | || ||||| | ||||||||||
Sbjct 34416 AATGGCTGAGGCTCTGGCTTGGCTCTTGCCTCCCTGCTGGCTCCCCCGACAAGGATGAGC 34357
Query 2174 TCGCGGCATGATTGAGTTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCGG 2233
| || ||||||| ||| | || |||||| || | || ||| |||||||||||||||||||
Sbjct 34356 TTGCAGCATGATCGAGATGGATCCGCACGACAGAATTGACCTGACCGGCCCTTGGGCCGG 34297
Query 2234 TTTTTCTTTCCTCGGTGATCGTCTGATCACGCCCGAAGGCCGCGAGCTACTTCCTGAAGA 2293
||| |||| |||| | || |||| || || || | | |||| || ||
Sbjct 34296 TTTCGGCTTCCAAGGTGGGCACATGTTCACCCCTGAGGGACACCAGCTCGAACCGTGCGA 34237
Query 2294 TCTGGCCTGGCTGTCACTCACCGCCTGCCAAGCGCAGGAATGGCGCCGGATGATGG 2349
|| ||||| ||| || ||| | | |||| ||||||||| || |||||||
Sbjct 34236 CATGACCTGGTGGTCCCTGACCTGCAACATTGCGCGGGAATGGCGACGAATGATGG 34181
Score = 104 bits (114), Expect = 1e-18
Identities = 90/109 (83%), Gaps = 2/109 (2%)
Strand=Plus/Plus
Query 2486 GATGGCTGGCCCTGACGCCGAGCCACCAGCGGTAGACCTGCCGATACTGGGGCCCATGCC 2545
||||||||| || ||||||||||| |||| | | |||||| |||| ||||| | |
Sbjct 34674 GATGGCTGGGCCCGACGCCGAGCCGGCAGCAGCGGTCCTGCCTATACCTGGGCCGAGATC 34733
Query 2546 TCGCCAGCGCGTGTGAGGCGCTTCCGTA-GGGGCGCTGCCCCTACACCC 2593
|||||||||||||||||| ||||||||| |||||||| ||||| |||||
Sbjct 34734 TCGCCAGCGCGTGTGAGGTGCTTCCGTAGGGGGCGCT-CCCCTGCACCC 34781
Score = 96.9 bits (106), Expect = 2e-16
Identities = 59/63 (94%), Gaps = 0/63 (0%)
Strand=Plus/Minus
Query 2535 GGGCCCATGCCTCGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 2594
||||| | ||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 34004 GGGCCAAGGCCGCGTCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 33945
Query 2595 GGA 2597
|||
Sbjct 33944 GGA 33942
Score = 78.8 bits (86), Expect = 4e-11
Identities = 54/61 (89%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 2535 GGGCCCATGCCTCGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 2594
||||| | | | ||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 26030 GGGCCGAGGTCCTGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCTCCGCCCCTACACCCC 25971
Query 2595 G 2595
|
Sbjct 25970 G 25970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 21943318798244
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |