Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_007189.1 Length=6907 Score E Sequences producing significant alignments: (Bits) Value seq131851 253 9e-64 >seq131851 Length=40801 Score = 253 bits (280), Expect = 9e-64 Identities = 304/403 (75%), Gaps = 20/403 (5%) Strand=Plus/Minus Query 1957 AAACTCGCCACGGTGGTCATGGCGCTATGCCTGTTCGTGGGTGCCGCCCTACCCCACGAC 2016 || |||||| | || |||||||| |||||| || || |||||| |||||| | Sbjct 26599 AAGCTCGCCGCCACGGCAATGGCGCTGTGCCTGGCTGTTGGATTCGCCCTGCCCCACAAG 26540 Query 2017 GTGCAGGCTATGCCG---CAGGCT--GGTAATGCCTTGCACGATATACATTATGCGAAAT 2071 | ||||| |||| |||||| | || || ||| ||||||||||||| ||| Sbjct 26539 GCTCAGGCC--GCCGTAGCAGGCTTTGACAAGTCC--GCAGTCTATACATTATGCGCAAT 26484 Query 2072 CACGTATCCG-CCGGATCTGGGCCTTTGTTGGGTCCGCGTGGCAATGGCTGGGCCTCTGG 2130 | || | || |||| || || || || || || ||||||||||||||||||||| Sbjct 26483 GCAATGTCTGGCCTGATCCGG---TTCGTGGGCTCGGCTTGGCAATGGCTGGGCCTCTGG 26427 Query 2131 CTCGGCTC-TTGCCTGCGTCCTCAGTCCCCGGCCAAGGATGAGATCGCGGCATGATTGAG 2189 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 26426 CTCGGCTCCTTGCCTGCGCCCTCAGTCCCCGGCCAAGGATGAGATCGCGGCATGGTTGAG 26367 Query 2190 TTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCGGTTTTTCTTTCCTCGGT 2249 || |||||||||||||||||||||||||||||||||||||| ||||| |||| ||| Sbjct 26366 TTCGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCTGGTTTCGGCTTCCAAGGT 26307 Query 2250 GATCGTCTGATCACGCCCGAAGGCCGCGAGCT---ACTTCCTGAAGATCTGGCCTGGCTG 2306 | | || |||| || ||||| | | |||| || |||| ||| |||||||| | Sbjct 26306 GGGCACATGTTCACTCCTGAAGGTCACCAGCTGGAAC--CCTG-CGATATGGCCTGGTGG 26250 Query 2307 TCACTCACCGCCTGCCAAGCGCAGGAATGGCGCCGGATGATGG 2349 || || ||| | | |||| ||||||||| || ||||||| Sbjct 26249 TCCCTGACCTGCAACATTGCGCGGGAATGGCGACGAATGATGG 26207 Score = 203 bits (224), Expect = 1e-48 Identities = 154/181 (85%), Gaps = 2/181 (1%) Strand=Plus/Minus Query 2055 TATACATTATGCGAAATCACGTATCCGCCGGATCTGGGCCTTTGTTGGGTCCGCGTGGCA 2114 |||||||||||| ||||| ||| |||||| ||||||||||||||||| ||||| ||||| Sbjct 23806 TATACATTATGCAAAATCTCGTCCCCGCCGAATCTGGGCCTTTGTTGGCTCCGCATGGCA 23747 Query 2115 ATGGCTGGGCCTCTGGCTCGGCTCTTGCCTGCGTCCTCAGTC--CCCGGCCAAGGATGAG 2172 |||||||||||||||||||||| | ||||| || ||| || | ||| ||| | ||||| Sbjct 23746 ATGGCTGGGCCTCTGGCTCGGCCCCTGCCTCCGCCCTGAGACCGCCCAGCCTTGTATGAG 23687 Query 2173 ATCGCGGCATGATTGAGTTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCG 2232 ||||||||||||| | ||| ||||||||||||||||| ||| ||||||||| | |||| | Sbjct 23686 ATCGCGGCATGATCGTGTTCGACCCGCACCACCGTATTGACCTGACCGGCCTTCGGGCGG 23627 Query 2233 G 2233 | Sbjct 23626 G 23626 Score = 170 bits (188), Expect = 8e-39 Identities = 216/296 (73%), Gaps = 1/296 (0%) Strand=Plus/Minus Query 2054 ATATACATTATGCGAAATCACGTATCCGCCGGATCTGGGCCTTTGTTGGGTCCGCGTGGC 2113 |||||||||||||||||| ||||| | || || || || || || |||||||||| Sbjct 34475 ATATACATTATGCGAAATGCTGTATCAGTCGTTGGTGAGC-TTCGTCGGCTCCGCGTGGC 34417 Query 2114 AATGGCTGGGCCTCTGGCTCGGCTCTTGCCTGCGTCCTCAGTCCCCGGCCAAGGATGAGA 2173 |||||||| | |||||||| ||||||||||| | | || ||||| | |||||||||| Sbjct 34416 AATGGCTGAGGCTCTGGCTTGGCTCTTGCCTCCCTGCTGGCTCCCCCGACAAGGATGAGC 34357 Query 2174 TCGCGGCATGATTGAGTTTGACCCGCACCACCGTATCGACTTGACCGGCCCTTGGGCCGG 2233 | || ||||||| ||| | || |||||| || | || ||| ||||||||||||||||||| Sbjct 34356 TTGCAGCATGATCGAGATGGATCCGCACGACAGAATTGACCTGACCGGCCCTTGGGCCGG 34297 Query 2234 TTTTTCTTTCCTCGGTGATCGTCTGATCACGCCCGAAGGCCGCGAGCTACTTCCTGAAGA 2293 ||| |||| |||| | || |||| || || || | | |||| || || Sbjct 34296 TTTCGGCTTCCAAGGTGGGCACATGTTCACCCCTGAGGGACACCAGCTCGAACCGTGCGA 34237 Query 2294 TCTGGCCTGGCTGTCACTCACCGCCTGCCAAGCGCAGGAATGGCGCCGGATGATGG 2349 || ||||| ||| || ||| | | |||| ||||||||| || ||||||| Sbjct 34236 CATGACCTGGTGGTCCCTGACCTGCAACATTGCGCGGGAATGGCGACGAATGATGG 34181 Score = 104 bits (114), Expect = 1e-18 Identities = 90/109 (83%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 2486 GATGGCTGGCCCTGACGCCGAGCCACCAGCGGTAGACCTGCCGATACTGGGGCCCATGCC 2545 ||||||||| || ||||||||||| |||| | | |||||| |||| ||||| | | Sbjct 34674 GATGGCTGGGCCCGACGCCGAGCCGGCAGCAGCGGTCCTGCCTATACCTGGGCCGAGATC 34733 Query 2546 TCGCCAGCGCGTGTGAGGCGCTTCCGTA-GGGGCGCTGCCCCTACACCC 2593 |||||||||||||||||| ||||||||| |||||||| ||||| ||||| Sbjct 34734 TCGCCAGCGCGTGTGAGGTGCTTCCGTAGGGGGCGCT-CCCCTGCACCC 34781 Score = 96.9 bits (106), Expect = 2e-16 Identities = 59/63 (94%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 2535 GGGCCCATGCCTCGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 2594 ||||| | ||| || ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34004 GGGCCAAGGCCGCGTCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 33945 Query 2595 GGA 2597 ||| Sbjct 33944 GGA 33942 Score = 78.8 bits (86), Expect = 4e-11 Identities = 54/61 (89%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2535 GGGCCCATGCCTCGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCGCTGCCCCTACACCCC 2594 ||||| | | | ||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 26030 GGGCCGAGGTCCTGCCAGCGCGTGTGAGGCGCTTCCGTAGGGGCTCCGCCCCTACACCCC 25971 Query 2595 G 2595 | Sbjct 25970 G 25970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 21943318798244