Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_009552.2
Length=40863
Score E
Sequences producing significant alignments: (Bits) Value
seq161904 246 8e-61
>seq161904
Length=2185
Score = 246 bits (272), Expect = 8e-61
Identities = 481/708 (68%), Gaps = 2/708 (0%)
Strand=Plus/Plus
Query 37736 GTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAA 37795
||||||||| | ||| | |||||| || | | || || || ||||| || || || ||
Sbjct 866 GTGTTCGGCTGGCAGATGCGCTTCGACCTCAACGAAGGTTTCCCGCTGGTCACCACCAAG 925
Query 37796 AAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAAC 37855
||| |||| | || || ||||| | || ||||| ||||| | ||||||||||| |||
Sbjct 926 AAACTGCACCTGCGTTCGATCATCCACGAGCTGCTGTGGTTCCTGAAAGGCGATACCAAC 985
Query 37856 GTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGC 37915
|| |||| || |||| || || ||| ||||| || ||||| |||| |||||
Sbjct 986 ATCGGCTACCTGAAGGACAACCAGGTACGGATCTGGGACGAATGGGCCGACGGCAACGGT 1045
Query 37916 GATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACC 37975
||||| |||||| | |||||| ||| |||||| ||| | || |||||
Sbjct 1046 GATCTTGGCCCGGTGTACGGCAAGCAGTGGCGCAGCTGGGCTGCCGCCGACGGCCGTGAG 1105
Query 37976 ATCGACCAGATCGCA-TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCT 38034
||||||||||| ||| ||| | || || ||||||| || || || |||| || |||||
Sbjct 1106 ATCGACCAGAT-GCAGTGGCTGGTGGACGAGATCAGGCGCAACCCCGATTCGCGGCGGCT 1164
Query 38035 GCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTA 38094
| |||| ||||| ||||| || | || | ||||| |||| ||| || || |
Sbjct 1165 GGTGGTCAGCGCCTGGAACGTGGGCGAGCTCTCGCAGATGGCGCTGATGCCCTGCCACAA 1224
Query 38095 CGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGT 38154
| || |||||||| || ||| | ||| || | ||| || | | |||||| ||
Sbjct 1225 CCTGTTCCAGTTCTACGTGGCCGATGGCAGGCTCAGTTGCCAGTTGTACCAGCGCAGCGG 1284
Query 38155 TGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGT 38214
|| | || | || ||||||| |||||||| ||||| |||||| |||| ||||||||
Sbjct 1285 CGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTGACCCATATGGT 1344
Query 38215 AGCCCAACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTT 38274
|| || || | ||| ||||| || || | ||| ||||||| || |
Sbjct 1345 TGCGCAGGCGACCGGCCTGGGCGTCGGCGATTTCGTGCACACGCTGGGCGACGCGCACCT 1404
Query 38275 GTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCC 38334
||| || ||| | || || || |||||| ||||| |||||| |||||||
Sbjct 1405 GTATTCGAACCATTTCGAGCAGGCCCGCGAGCAGCTCTCGCGCTCGCCGCGAGCGCTGCC 1464
Query 38335 GAAGCTTGTGCTGAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGA 38394
|||||| | |||| | | || | | | | || | || | | ||||||| |
Sbjct 1465 GAAGCTGTGGTTGAACCCGGAGGTGACCGATCTGTTCGGCTTCCAGTTCGACGACATCCG 1524
Query 38395 AATCGTCGGCTACGATCCGCATCCGGCGATTAAAGCACCGGTGGCGGT 38442
|||| ||| |||||||| ||||||||||| || || |||||||||||
Sbjct 1525 CATCGACGGATACGATCCACATCCGGCGATCAAGGCGCCGGTGGCGGT 1572
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130364788958650
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |