Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13] 177,401 sequences; 1,960,317,893 total letters Query= NC_009552.2 Length=40863 Score E Sequences producing significant alignments: (Bits) Value seq161904 246 8e-61 >seq161904 Length=2185 Score = 246 bits (272), Expect = 8e-61 Identities = 481/708 (68%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 37736 GTGTTCGGCCGCCAGCTCCGCTTCAACTTACAAGATGGATTTCCGCTCGTGACAACGAAA 37795 ||||||||| | ||| | |||||| || | | || || || ||||| || || || || Sbjct 866 GTGTTCGGCTGGCAGATGCGCTTCGACCTCAACGAAGGTTTCCCGCTGGTCACCACCAAG 925 Query 37796 AAATTGCATATCCGCTCCATCATTTATGAACTGCTTTGGTTTTTAAAAGGCGATACGAAC 37855 ||| |||| | || || ||||| | || ||||| ||||| | ||||||||||| ||| Sbjct 926 AAACTGCACCTGCGTTCGATCATCCACGAGCTGCTGTGGTTCCTGAAAGGCGATACCAAC 985 Query 37856 GTCCGCTATTTGCAGGAGAATGGCGTGACGATTTGGGATGAGTGGGCGGACGAAAACGGC 37915 || |||| || |||| || || ||| ||||| || ||||| |||| ||||| Sbjct 986 ATCGGCTACCTGAAGGACAACCAGGTACGGATCTGGGACGAATGGGCCGACGGCAACGGT 1045 Query 37916 GATCTCGGCCCGATTTACGGCGCGCAATGGCGCTCGTGGAAGGGAGCAGACGGGAAAACC 37975 ||||| |||||| | |||||| ||| |||||| ||| | || ||||| Sbjct 1046 GATCTTGGCCCGGTGTACGGCAAGCAGTGGCGCAGCTGGGCTGCCGCCGACGGCCGTGAG 1105 Query 37976 ATCGACCAGATCGCA-TGGGTTGTCGAAGAGATCAAACGAAATCCGCATTCACGCCGGCT 38034 ||||||||||| ||| ||| | || || ||||||| || || || |||| || ||||| Sbjct 1106 ATCGACCAGAT-GCAGTGGCTGGTGGACGAGATCAGGCGCAACCCCGATTCGCGGCGGCT 1164 Query 38035 GCTGGTGAGCGCTTGGAATGTAGCAGAATTGGACGAGATGAAGCTGCCGCCGTGTCATTA 38094 | |||| ||||| ||||| || | || | ||||| |||| ||| || || | Sbjct 1165 GGTGGTCAGCGCCTGGAACGTGGGCGAGCTCTCGCAGATGGCGCTGATGCCCTGCCACAA 1224 Query 38095 CGCCTTTCAGTTCTATGTCGCCAACGGCCGGTTGTCATGCATGTGGCAGCAGCGCTCCGT 38154 | || |||||||| || ||| | ||| || | ||| || | | |||||| || Sbjct 1225 CCTGTTCCAGTTCTACGTGGCCGATGGCAGGCTCAGTTGCCAGTTGTACCAGCGCAGCGG 1284 Query 38155 TGATACGTTTTTAGGGTTGCCGTTTAACATCGCGAGCTACGCGCTGTTGACGCATATGGT 38214 || | || | || ||||||| |||||||| ||||| |||||| |||| |||||||| Sbjct 1285 CGACATCTTCCTCGGCGTGCCGTTCAACATCGCCAGCTATGCGCTGCTGACCCATATGGT 1344 Query 38215 AGCCCAACAATGCGACTTGGATGTCGGTGAACTCATTTTCACCGGCGGCGACGTCCATTT 38274 || || || | ||| ||||| || || | ||| ||||||| || | Sbjct 1345 TGCGCAGGCGACCGGCCTGGGCGTCGGCGATTTCGTGCACACGCTGGGCGACGCGCACCT 1404 Query 38275 GTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTGCC 38334 ||| || ||| | || || || |||||| ||||| |||||| ||||||| Sbjct 1405 GTATTCGAACCATTTCGAGCAGGCCCGCGAGCAGCTCTCGCGCTCGCCGCGAGCGCTGCC 1464 Query 38335 GAAGCTTGTGCTGAAACGGAAGCCGCCGTCTATCTTTGACTATGAATACGACGACTTTGA 38394 |||||| | |||| | | || | | | | || | || | | ||||||| | Sbjct 1465 GAAGCTGTGGTTGAACCCGGAGGTGACCGATCTGTTCGGCTTCCAGTTCGACGACATCCG 1524 Query 38395 AATCGTCGGCTACGATCCGCATCCGGCGATTAAAGCACCGGTGGCGGT 38442 |||| ||| |||||||| ||||||||||| || || ||||||||||| Sbjct 1525 CATCGACGGATACGATCCACATCCGGCGATCAAGGCGCCGGTGGCGGT 1572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130364788958650