Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteronotus_20parnellii_20[genbank_20GCA_5F000465405.1_202013-09-13]
177,401 sequences; 1,960,317,893 total letters
Query= NC_031120.1
Length=241147
Score E
Sequences producing significant alignments: (Bits) Value
seq161904 174 2e-38
seq176166 86.0 1e-11
seq165364 84.2 3e-11
>seq161904
Length=2185
Score = 174 bits (192), Expect = 2e-38
Identities = 184/240 (77%), Gaps = 2/240 (1%)
Strand=Plus/Plus
Query 196124 GACCGTACCGGCACAGGCACTA-CGTCCTATCTCGGCGCACAGATGCGCTTCGATCTGCA 196182
||||| ||||| || ||||| | | | | ||||| |||||||||||||| || |
Sbjct 839 GACCGCACCGGTACCGGCACCCGCAGCGTGT-TCGGCTGGCAGATGCGCTTCGACCTCAA 897
Query 196183 AGACGGATTCCCGCTGGTCACCACGAAGAAACTCCATCTGCGTTCCATCATTCATGAACT 196242
|| || ||||||||||||||||| |||||||| || |||||||| ||||| || || ||
Sbjct 898 CGAAGGTTTCCCGCTGGTCACCACCAAGAAACTGCACCTGCGTTCGATCATCCACGAGCT 957
Query 196243 GCTGTGGTTCCTCAACGGGGACACCAACATCAAGTACCTGAATGACAACGGTGTCTCTAT 196302
|||||||||||| || || || ||||||||| |||||||| |||||| || ||
Sbjct 958 GCTGTGGTTCCTGAAAGGCGATACCAACATCGGCTACCTGAAGGACAACCAGGTACGGAT 1017
Query 196303 CTGGAACGAGTGGGCGAACGAACTCGGTAACCTGGGGCCGGTTTACGGTAAGCAGTGGCG 196362
|||| |||| ||||| ||| |||| | || || ||||| ||||| |||||||||||
Sbjct 1018 CTGGGACGAATGGGCCGACGGCAACGGTGATCTTGGCCCGGTGTACGGCAAGCAGTGGCG 1077
>seq176166
Length=10187
Score = 86.0 bits (94), Expect = 1e-11
Identities = 62/72 (86%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||| || ||||||||||| | |||||||||||||| ||||||
Sbjct 6572 GTAGTTCAGCTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCCGT 6513
Query 3857 CAGTCCTGCCAT 3868
| | | |||||
Sbjct 6512 CCGCTCCGCCAT 6501
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||| || ||||||||||| | |||||||||||||| ||||||
Sbjct 6733 GTAGTTCAGCTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCCGT 6674
Query 3857 C 3857
|
Sbjct 6673 C 6673
>seq165364
Length=2733
Score = 84.2 bits (92), Expect = 3e-11
Identities = 55/61 (90%), Gaps = 0/61 (0%)
Strand=Plus/Plus
Query 3797 GTAGTTCAGCTGGTTAGAATACTTGCCTGTCACGCAAGTGGTCGCGGGTTCGATTCCCGT 3856
|||||||||||||||||||| || ||||||||||| | |||||||||||||| ||||||
Sbjct 136 GTAGTTCAGCTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCCGT 195
Query 3857 C 3857
|
Sbjct 196 C 196
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769831495083720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |