Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20alecto_20[refseq_20GCF_5F000325575.1_202013-12-04] 65,598 sequences; 1,985,975,446 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq12508 77.0 5e-12 >seq12508 Length=2181808 Score = 77.0 bits (84), Expect = 5e-12 Identities = 84/109 (77%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 6 AGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGC 65 |||| |||| ||| |||||| || || ||| || | || |||| | || || || Sbjct 3782 AGAGTAACCA-GGACTTCAGA-TATTTCATTTATGTGCTTGGCTGAGGGGCCAATGGGGC 3839 Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 3840 AAAGCTACCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC 3888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818679414272