Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq33393 174 3e-41 seq30014 174 3e-41 >seq33393 Length=1959 Score = 174 bits (192), Expect = 3e-41 Identities = 208/278 (75%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 973 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 914 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 913 TCAAAGCAGGCCAGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 855 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 854 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 795 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 794 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 735 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||||||||| Sbjct 734 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 698 >seq30014 Length=4790 Score = 174 bits (192), Expect = 3e-41 Identities = 208/278 (75%), Gaps = 6/278 (2%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 3368 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 3309 Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 |||||||||||| || | |||| ||| |||||||| ||||||||| |||| Sbjct 3308 TCAAAGCAGGCCAGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 3250 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||||| | || | | |||||||| ||||| | |||||| | Sbjct 3249 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 3190 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| ||||| || | |||||||| Sbjct 3189 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 3130 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || ||||| |||||||||||||||| |||||||||| Sbjct 3129 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 3093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914869667712