Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05]
36,094 sequences; 2,198,284,804 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq33393 174 3e-41
seq30014 174 3e-41
>seq33393
Length=1959
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 973 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 914
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 913 TCAAAGCAGGCCAGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 855
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 854 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 795
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 794 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 735
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 734 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 698
>seq30014
Length=4790
Score = 174 bits (192), Expect = 3e-41
Identities = 208/278 (75%), Gaps = 6/278 (2%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 3368 ATGCTCTTAGCTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 3309
Query 98 TCAAAGCAGGCCTTTGCTC---GAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
|||||||||||| || | |||| ||| |||||||| ||||||||| ||||
Sbjct 3308 TCAAAGCAGGCCAGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAATAGGACC-GCGG 3250
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214
||||||||||||||||| | || | | |||||||| ||||| | |||||| |
Sbjct 3249 TTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGATTAAGAGGGACGGCCGGGGGCATTC 3190
Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274
||||| | |||||||||||||||||| ||||| || | ||||||||
Sbjct 3189 GTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGAGCGAAAGCA 3130
Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| ||||| |||||||||||||||| ||||||||||
Sbjct 3129 TTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 3093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914869667712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |