Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05] 36,094 sequences; 2,198,284,804 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq30014 244 2e-62 seq33393 187 4e-45 >seq30014 Length=4790 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 2593 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 2651 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 2652 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 2710 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 2711 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 2770 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 2771 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 2830 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 2831 ATCAATCTGTC 2841 >seq33393 Length=1959 Score = 187 bits (206), Expect = 4e-45 Identities = 195/251 (78%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || |||| ||| | |||| |||||||||||||| |||||||||| | Sbjct 198 GTCAGTGTAGGGCTCGTGAAACCCCGGACATTTAAGGGCATCACAGCCCTGTTATTGG-T 256 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAACCA-T 130 ||| || | |||||| | |||| | |||||| |||||| | | | || ||| | Sbjct 257 CAATCT-CGGGTGGCTGAACGCCATTTGTCCCTTTAAGAAATTGGGGGACGCCGACCGCT 315 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | || ||||| | |||||||||||||||||| Sbjct 316 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTGTCGTTTGGTATCGGAATTAACCAGAC 375 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||||| Sbjct 376 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCTCCCACGGAATCGAGAAAGAGCT 435 Query 248 ATCAATCTGTC 258 ||||||| ||| Sbjct 436 ATCAATCAGTC 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796521390414