Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pteropus_20vampyrus_20[refseq_20GCF_5F000151845.1_202014-12-05]
36,094 sequences; 2,198,284,804 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq30014 244 2e-62
seq33393 187 4e-45
>seq30014
Length=4790
Score = 244 bits (270), Expect = 2e-62
Identities = 208/251 (83%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| |
Sbjct 2593 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 2651
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130
||| || | |||||| | |||| | |||||||||||||| | | || ||| |
Sbjct 2652 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 2710
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | |||||||||||||||||||||||||||||
Sbjct 2711 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 2770
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 2771 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 2830
Query 248 ATCAATCTGTC 258
|||||||||||
Sbjct 2831 ATCAATCTGTC 2841
>seq33393
Length=1959
Score = 187 bits (206), Expect = 4e-45
Identities = 195/251 (78%), Gaps = 9/251 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||| || |||| ||| | |||| |||||||||||||| |||||||||| |
Sbjct 198 GTCAGTGTAGGGCTCGTGAAACCCCGGACATTTAAGGGCATCACAGCCCTGTTATTGG-T 256
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA---GCCAGCCACCAACCA-T 130
||| || | |||||| | |||| | |||||| |||||| | | | || ||| |
Sbjct 257 CAATCT-CGGGTGGCTGAACGCCATTTGTCCCTTTAAGAAATTGGGGGACGCCGACCGCT 315
Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
| | | | | ||| |||||| | | || ||||| | ||||||||||||||||||
Sbjct 316 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTGTCGTTTGGTATCGGAATTAACCAGAC 375
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247
||||| ||||||||||||||||||||||||||||||| |||| ||||| ||||||||||
Sbjct 376 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCTCCCACGGAATCGAGAAAGAGCT 435
Query 248 ATCAATCTGTC 258
||||||| |||
Sbjct 436 ATCAATCAGTC 446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796521390414
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |