Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq138012 473 4e-131
seq85610 298 2e-78
seq18501 295 2e-77
seq4153 273 7e-71
seq68379 255 2e-65
seq85200 145 2e-32
seq158649 86.0 2e-14
seq77438 80.6 9e-13
seq66940 75.2 4e-11
>seq138012
Length=1780
Score = 473 bits (524), Expect = 4e-131
Identities = 283/297 (95%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 462 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 403
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 402 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 343
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 342 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 283
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 282 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 223
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 222 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 166
Score = 118 bits (130), Expect = 3e-24
Identities = 103/128 (80%), Gaps = 5/128 (4%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 758 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 699
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||| |||| ||| ||||||||| ||||||||||||||| || |||| |||||| |
Sbjct 698 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGGCACTGTC-----CCCGGAGC 644
Query 127 GGCCCGCG 134
|| ||||
Sbjct 643 GGGTCGCG 636
>seq85610
Length=15333
Score = 298 bits (330), Expect = 2e-78
Identities = 252/312 (81%), Gaps = 14/312 (4%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||| ||||||||| ||| ||||| | | ||| |||| |||||||
Sbjct 1955 CTCCCACTTATTCTGCACCTCTCATGTCTCTTCACGGTGCCCTACTGGAGTTAAGCTCAG 1896
Query 297 CAGGGTCTTCTTTCCCCG------------CTGATTCCGCCAAGCCCGTTCCCTTGGCTG 344
|||||||||||||||| |||||||| ||||| || ||| ||||||||
Sbjct 1895 CAGGGTCTTCTTTCCCNNNNNNNNNNNCTACTGATTCCACCAAGGCCATTCACTTGGCTG 1836
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
||||||| || |||||| | |||||||||||||||||| ||| | |||||||||| | ||
Sbjct 1835 TGGTTTCCCTGGATAGTGGGTAGGGACAGTGGGAATCTGGTTCACCCATTCATGCACCTC 1776
Query 405 ACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTT 464
||||||| | |||||| ||||||| ||||||| |||||||||||||||| |||| |||
Sbjct 1775 ACTAATTGGGTGACGACGCATTTGACTACCTT--GAGAGTCATAGTTACTTTCGCCATTT 1718
Query 465 ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524
|| || ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1717 ACTGGCCCTTCATTGAATTTTCTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATC 1658
Query 525 GCGTCAACATCA 536
| |||||| ||
Sbjct 1657 ACATCAACACCA 1646
>seq18501
Length=25746
Score = 295 bits (326), Expect = 2e-77
Identities = 245/297 (82%), Gaps = 3/297 (1%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||| |||||||||||||||| ||| ||||| | | || |||| ||| | ||
Sbjct 17269 CTCCCACGTATTCTACACCTCTCATGTCTCTTCACTGTGCCAGAGCAGAGAAAAGTTGAA 17210
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|||| |||||||||| || |||||| |||||||| ||| ||||| | | | || | | |
Sbjct 17209 CAGG--CTTCTTTCCCTGCCGATTCCACCAAGCCCATTCTCTTGGATATAGGTTTGATGG 17152
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| ||||||||||||||||||||| |||||||||||| | |||||| ||||| |
Sbjct 17151 ATAGTAGGCAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACATCACTACTTAGAAG 17092
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
| |||| | ||| || |||||||||| |||||||||||||| || |||||| ||||||
Sbjct 17091 ATGAGGTACTTGTCTGCCTTAAGAGAATCATAGTTACTCCC-CCATTTACCAGCGCTTCA 17033
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||| ||||| |||| | ||||||||||||||||||||| |||||||||
Sbjct 17032 TTGAATTTCTTCGCTTTGGCATTTAAAGCACTGGGCAGAAATCACATCGCGTCAACA 16976
>seq4153
Length=8259
Score = 273 bits (302), Expect = 7e-71
Identities = 243/303 (80%), Gaps = 7/303 (2%)
Strand=Plus/Minus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAA---AGTCGGACTAGAGTCAAGCTC 294
||||||||||||||||||| | | ||| ||||| || || |||||||||||||
Sbjct 6621 TCCCACTTATTCTACACCTTTAATGTCTCTTCACTTGCCAGACGAGATAGAGTCAAGCTC 6562
Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
||||||||| | |||| ||||||||| |||| ||| ||||||||||||||||||| ||
Sbjct 6561 AACAGGGTCCACGTTCCTAGCTGATTCCTCCAACCCCATTCCCTTGGCTGTGGTTTCACT 6502
Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414
|| || || || | ||||||||||| || || |||||||||||| | |||||||||||
Sbjct 6501 GGAGAGAAGGTAAGTACAGTGGGAATATCATTTATCCATTCATGCAGGGCACTAATTAGA 6442
Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT----CCCGCCGTTTACCCGC 470
||| |||||| ||||| ||||| ||||||| |||||| | || ||| || || | |
Sbjct 6441 TGAGGAGGCACTTGGCCTCCTTAGGAGAGTCCTAGTTATTCCTGCCTGCCATTCACTCAC 6382
Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530
||| |||||||||||||| |||| |||||||||||||||||||||||||| | |||
Sbjct 6381 GCTGCACTGAATTTCTTCACTCTGACCTTCAGAGCACTGGGCAGAAATCACATCACATCA 6322
Query 531 ACA 533
|||
Sbjct 6321 ACA 6319
>seq68379
Length=10300
Score = 255 bits (282), Expect = 2e-65
Identities = 233/295 (79%), Gaps = 13/295 (4%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||| |||||||||| |||| |||| | || ||||||||||||||
Sbjct 2596 CTCCCACTTATTATACACCTCTCGAGTCTCTTCATTGTTCCAGAATAGAGTCAAGCTCAG 2655
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
|| || || ||||| | ||||||| ||||| | ||||||| ||||||||||| ||| |
Sbjct 2656 CAAAGTATTTTTTCCTCACTGATTCTGCCAAATCTGTTCCCTCGGCTGTGGTTTTGCTGG 2715
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||| ||||||| ||| ||| |||||||| |||| ||| ||||||
Sbjct 2716 ATAGTAGGTAGGGACAGTAGGAATCTTGTTCATCTATTCATGCATGTCAGTAA-TAGATG 2774
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||| |||| | |||||| || | |||||| | ||||
Sbjct 2775 ACGAGGCATTTGGCTACCTTAAGGGAGTTAGAGTTACGTCCATCATTTACCTGTGCTTCA 2834
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531
|||||||| |||||||||||| || |||||||||| ||||||||
Sbjct 2835 TTGAATTT------------ATTCAGAGCACTAGGTAGAAATCACACTGCGTCAA 2877
>seq85200
Length=33114
Score = 145 bits (160), Expect = 2e-32
Identities = 207/286 (72%), Gaps = 8/286 (3%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTCA 295
||||| |||| |||| || || ||| ||||| | | | || || ||||| | |||
Sbjct 19599 CTCCCGCTTAATCTATACTTCCTGTGTCTCTTCACCATGCCAGGTTTACAGTCAGGTTCA 19658
Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355
| || || |||||| ||| ||||| |||||||| ||||||||||||||||||| |
Sbjct 19659 AGAGAGTGTTCTTTGCCCAAAGATTCTGCCAAGCCA-TTCCCTTGGCTGTGGTTTCATCA 19717
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
| || | | |||| | | ||| || | | | ||||| | ||| ||||| |||
Sbjct 19718 GGTAATGAA----GACAATAGCAATATCACTCAGCTATTCACACATGTCCTTAATTCGAT 19773
Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCTT 474
| ||| ||| || |||||||||||||||||||||||| ||| | ||||| ||||
Sbjct 19774 GT-GAGACATATGACTACCTTAAGAGAGTCATAGTTACACCCATCAATTTACTTAAGCTT 19832
Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
| ||| ||| |||||||||||||| | ||||||||| ||||||
Sbjct 19833 CTGTAAATATCTCCACTTTGACATTCACATCACTGGGCAAAAATCA 19878
>seq158649
Length=9679
Score = 86.0 bits (94), Expect = 2e-14
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || ||| ||||||| |||| |||| | ||||| | |||||||| ||
Sbjct 5790 CTTCTGCTCCACGCGAGGTTTCTGTCCTCCCTGAGCTCACCTTAAGGCACCTGCGATACC 5849
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| |||| ||||||||||| |||||||||||||| || ||||
Sbjct 5850 GTTGGACAGGTGTGCCGCCCCCATGAAACTCCCCACCTGGCACTGTC 5896
>seq77438
Length=24637
Score = 80.6 bits (88), Expect = 9e-13
Identities = 95/124 (77%), Gaps = 6/124 (5%)
Strand=Plus/Plus
Query 286 GTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCC-GCCAAGCCCGTTCCCTTGGCTG 344
|| ||||||||| |||||| |||| |||||| | ||| ||| ||| || ||| ||
Sbjct 18992 GTTAAGCTCAACCAGGTCTT---TCCCTGCTGATAACTGCCCAGCTAGTTACCGTGGTTG 19048
Query 345 TGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC 404
| |||| | ||| ||| ||||||||||||||||||| || |||||||| || || ||
Sbjct 19049 TA-TTTCA-TGGATCCTAGCTAGGGACAGTGGGAATCTCCTTCATCCATTCGTGGGCATC 19106
Query 405 ACTA 408
||||
Sbjct 19107 ACTA 19110
>seq66940
Length=41180
Score = 75.2 bits (82), Expect = 4e-11
Identities = 50/56 (89%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||| |||||| |||||||||||||| ||||||| |||||| | |||||||
Sbjct 18697 TGAATTTCTGCACTTTAACATTCAGAGCACTAGGCAGAATTCACATAGTGTCAACA 18752
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1632575504000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |