Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20ferrumequinum_20[genbank_20GCA_5F000465495.1_202013-
09-15] 160,500 sequences; 1,926,439,238 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq67339 91.5 6e-13
seq21882 89.7 2e-12
>seq67339
Length=57924
Score = 91.5 bits (100), Expect = 6e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 349094 CTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGG 349153
|| || ||||||||||| |||||| | | | |||||||||||||||||| | ||||
Sbjct 32954 CTCGGAATGCCCAGGGTGACGTTCATCTCGCCTCTGCCGGCAAAGTGGAAGGTGTTGAGG 32895
Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213
|||| ||| ||| |||||| ||||||| |||| | || || | ||| ||| ||| ||
Sbjct 32894 GTCATCTGTGTGGAGGGCTCCCCGATGCTCTGGGCAGCCAGCAGGCCCACCGCCTCACCC 32835
Query 349214 GGC 349216
|||
Sbjct 32834 GGC 32832
>seq21882
Length=9437
Score = 89.7 bits (98), Expect = 2e-12
Identities = 117/159 (74%), Gaps = 6/159 (4%)
Strand=Plus/Plus
Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046
||||| || |||| || ||||||||| || ||| || |||| ||||| | || |||||
Sbjct 6216 CTCGATCAGCATGCCGATGGTCATGCGTGATGGGAAGCCATGAGGGTTGAAGAGAATGTC 6275
Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103
|| | ||| | || |||||||||||||||| || | ||| ||| | | |
Sbjct 6276 AGGGACCATGCCACTCTCGCTGAAGGGCATGTCCTC--GGCCGGCCA-CAGCCTGCTCAG 6332
Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142
|| ||||||||| || ||||||||| ||||||||||||
Sbjct 6333 GATGCCCTTCTGCCCATGGCGGCTGGCGAACTTGTCCCC 6371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2080347566579000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |