Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq953 102 4e-20
seq5051 89.7 2e-16
seq707 75.2 5e-12
>seq953
Length=174257
Score = 102 bits (112), Expect = 4e-20
Identities = 85/103 (83%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCA-GGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||| | || |||||||||||||||| | ||||||||| ||||||||||||
Sbjct 87494 GGAAAAGAAACTTAGCAAGGATTCCCTCAGTAACAGTGAGTGAACATGGAAGAGCCCAGT 87553
Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
| |||||| |||||| |||||| | ||| ||||||| ||
Sbjct 87554 ACTGAATCCTTGCCCCGAGGTGGGACATAGGAAATGTGGCATA 87596
>seq5051
Length=1763
Score = 89.7 bits (98), Expect = 2e-16
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||||||||||||||| |||||||||| |||||||||||| |||| ||||||||||||||
Sbjct 576 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 518
>seq707
Length=464255
Score = 75.2 bits (82), Expect = 5e-12
Identities = 49/54 (91%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 49 AAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|| |||||||||| ||||||||||||| ||||||||||| ||| ||||||||||
Sbjct 352720 AATAGCCCAGCGCTGAATCCCCGCCCCACGGTGGGGCGCAGGAAATGTGGCGTA 352667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230262971760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |