Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq953 102 4e-20 seq5051 89.7 2e-16 seq707 75.2 5e-12 >seq953 Length=174257 Score = 102 bits (112), Expect = 4e-20 Identities = 85/103 (83%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCA-GGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||| | || |||||||||||||||| | ||||||||| |||||||||||| Sbjct 87494 GGAAAAGAAACTTAGCAAGGATTCCCTCAGTAACAGTGAGTGAACATGGAAGAGCCCAGT 87553 Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | |||||| |||||| |||||| | ||| ||||||| || Sbjct 87554 ACTGAATCCTTGCCCCGAGGTGGGACATAGGAAATGTGGCATA 87596 >seq5051 Length=1763 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| |||||||||| |||||||||||| |||| |||||||||||||| Sbjct 576 GGAAAAGAAACTAACAAGGATTCCCTTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGC 518 >seq707 Length=464255 Score = 75.2 bits (82), Expect = 5e-12 Identities = 49/54 (91%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 49 AAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || |||||||||| ||||||||||||| ||||||||||| ||| |||||||||| Sbjct 352720 AATAGCCCAGCGCTGAATCCCCGCCCCACGGTGGGGCGCAGGAAATGTGGCGTA 352667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230262971760