Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq30233 147 2e-33 >seq30233 Length=342 Score = 147 bits (162), Expect = 2e-33 Identities = 123/152 (81%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 23 CGGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTG 82 |||||||||| |||| ||| ||||||| |||||||||| ||||||||||||||| | Sbjct 168 CGGGGTCTTTCCGTCTTGTCGTGGGTAATGCGCATCTTCACGCATACTACAATTTCACCG 227 Query 83 AGC-TCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACC 141 || || || ||||||||| ||| || ||||||| |||||||||||||| Sbjct 228 GGCCTCTCG-TTGAGACAGTGTCCAAGTCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 286 Query 142 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 173 |||||||||||||||||||||||||||||||| Sbjct 287 CGACAAGGAATTTCGCTACCTTAGGACCGTTA 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546863709861