Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01001752.1
Length=400
Score E
Sequences producing significant alignments: (Bits) Value
seq54654 100 7e-19
>seq54654
Length=218
Score = 100 bits (110), Expect = 7e-19
Identities = 160/222 (72%), Gaps = 22/222 (10%)
Strand=Plus/Minus
Query 78 TCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACTCGCATC 136
|||||||| ||||||| ||||| || | || ||||||| || ||||||||||| | |
Sbjct 210 TCGGCGGAGGGGATTCTCACCCCTCTTATCGTTACTCATACCGGCATTCTCACTACC--C 153
Query 137 AACTCCACCACACAGTCACCCGGCAG--CTTCAC--CACTGACACGACGCTCCCCTACCC 192
| | | ||||| | ||||| | |||| | ||||| |||||||||||||
Sbjct 152 AGCGCT-CCACATTCCCTCCCGGAAATCCTTCGCTGCACTGGGT--ACGCTCCCCTACC- 97
Query 193 AACCACACAGGTTGCCAC----AGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGG 248
|| | | || | |||||||| | || || ||||||| |||||| ||||
Sbjct 96 ------ACGGTGTCCCGCCCATAGCTTCGGTG-ATCCGTTTAGCCCCGGTACATTTTCGG 44
Query 249 CGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290
|||| |||||||||||||||||| ||||||||||||||||
Sbjct 43 CGCGACGTCACTTGACCAGTGAGCTTTTACGCACTCTTTCAA 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1176852942336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |