Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq54654 100 7e-19 >seq54654 Length=218 Score = 100 bits (110), Expect = 7e-19 Identities = 160/222 (72%), Gaps = 22/222 (10%) Strand=Plus/Minus Query 78 TCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACTCGCATC 136 |||||||| ||||||| ||||| || | || ||||||| || ||||||||||| | | Sbjct 210 TCGGCGGAGGGGATTCTCACCCCTCTTATCGTTACTCATACCGGCATTCTCACTACC--C 153 Query 137 AACTCCACCACACAGTCACCCGGCAG--CTTCAC--CACTGACACGACGCTCCCCTACCC 192 | | | ||||| | ||||| | |||| | ||||| ||||||||||||| Sbjct 152 AGCGCT-CCACATTCCCTCCCGGAAATCCTTCGCTGCACTGGGT--ACGCTCCCCTACC- 97 Query 193 AACCACACAGGTTGCCAC----AGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGG 248 || | | || | |||||||| | || || ||||||| |||||| |||| Sbjct 96 ------ACGGTGTCCCGCCCATAGCTTCGGTG-ATCCGTTTAGCCCCGGTACATTTTCGG 44 Query 249 CGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAA 290 |||| |||||||||||||||||| |||||||||||||||| Sbjct 43 CGCGACGTCACTTGACCAGTGAGCTTTTACGCACTCTTTCAA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176852942336