Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq31027 262 7e-68
>seq31027
Length=333
Score = 262 bits (290), Expect = 7e-68
Identities = 225/278 (81%), Gaps = 0/278 (0%)
Strand=Plus/Minus
Query 13 CGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATAT 72
|||||||||||||||||| | |||| | ||||||||||||||||||||||||| || |
Sbjct 333 CGCCTCAGCGTCAGTTACAGGCCAGAGAGCCGCCTTCGCCACTGGTGTTCCTCCCGATCT 274
Query 73 CTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACA 132
||||||||||||||||||||| ||||||||| | ||||||| ||||||||| ||
Sbjct 273 CTACGCATTTCACCGCTACACCGGGAATTCCGCTCCCCTCTCCTGCACTCAAGTCCCCCA 214
Query 133 GTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCC 192
||||| ||||| | ||||||||| ||||||||| ||||| |||||
Sbjct 213 GTTTCCAATGCCATCCCACGGTTGAGCCGTGGCCTTTCACATCAGACTTAAGAGACCGCC 154
Query 193 TACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGC 252
| | |||||||||| |||||||| |||||| |||||| ||| ||||||| ||||||||||
Sbjct 153 TGCGCGCCCTTTACGCCCAATAATTCCGGACAACGCTCGCCCCCTACGTGTTACCGCGGC 94
Query 253 TGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||| ||||| |||| ||||
Sbjct 93 TGCTGGCACGTAGTTAGCCGGGGCTTCCTCCTGTGGTA 56
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 828290648269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |