Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq31027 262 7e-68 >seq31027 Length=333 Score = 262 bits (290), Expect = 7e-68 Identities = 225/278 (81%), Gaps = 0/278 (0%) Strand=Plus/Minus Query 13 CGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATAT 72 |||||||||||||||||| | |||| | ||||||||||||||||||||||||| || | Sbjct 333 CGCCTCAGCGTCAGTTACAGGCCAGAGAGCCGCCTTCGCCACTGGTGTTCCTCCCGATCT 274 Query 73 CTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACA 132 ||||||||||||||||||||| ||||||||| | ||||||| ||||||||| || Sbjct 273 CTACGCATTTCACCGCTACACCGGGAATTCCGCTCCCCTCTCCTGCACTCAAGTCCCCCA 214 Query 133 GTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCC 192 ||||| ||||| | ||||||||| ||||||||| ||||| ||||| Sbjct 213 GTTTCCAATGCCATCCCACGGTTGAGCCGTGGCCTTTCACATCAGACTTAAGAGACCGCC 154 Query 193 TACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCGGC 252 | | |||||||||| |||||||| |||||| |||||| ||| ||||||| |||||||||| Sbjct 153 TGCGCGCCCTTTACGCCCAATAATTCCGGACAACGCTCGCCCCCTACGTGTTACCGCGGC 94 Query 253 TGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||| ||||| |||| |||| Sbjct 93 TGCTGGCACGTAGTTAGCCGGGGCTTCCTCCTGTGGTA 56 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828290648269