Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq31027 161 3e-37 >seq31027 Length=333 Score = 161 bits (178), Expect = 3e-37 Identities = 109/121 (90%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 50 TGACGGTACCACAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAACACGTA 109 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||| |||||| |||||||||| | |||||||||||| ||| ||| ||| |||||||| Sbjct 110 GGGGGCGAGCGTTGTCCGGAATTA-TTGGGCGTAAAGGGCGCGCAGGCGGTCTCTTAAGT 168 Query 500 C 500 | Sbjct 169 C 169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1496649937536