Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq31027 331 2e-88
>seq31027
Length=333
Score = 331 bits (366), Expect = 2e-88
Identities = 236/271 (87%), Gaps = 0/271 (0%)
Strand=Plus/Plus
Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 62 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAACACGTAGGGGGCGAGCGT 121
Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126
| |||||||||| ||||||||||||| ||| ||| ||| ||||||||| || ||||||||
Sbjct 122 TGTCCGGAATTATTGGGCGTAAAGGGCGCGCAGGCGGTCTCTTAAGTCTGATGTGAAAGG 181
Query 127 CTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAG 186
| | ||||||||| |||| || || ||||||| || || ||||||||||| || ||
Sbjct 182 CCACGGCTCAACCGTGGGATGGCATTGGAAACTGGGGGACTTGAGTGCAGGAGAGGGGAG 241
Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246
|||||||| |||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 242 CGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAGTGGCGAAGG 301
Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGC 277
||||| |||| ||||||||||| |||||||
Sbjct 302 CGGCTCTCTGGCCTGTAACTGACGCTGAGGC 332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1202436701952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |