Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq31027 331 2e-88 >seq31027 Length=333 Score = 331 bits (366), Expect = 2e-88 Identities = 236/271 (87%), Gaps = 0/271 (0%) Strand=Plus/Plus Query 7 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGT 66 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 62 AGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAACACGTAGGGGGCGAGCGT 121 Query 67 TATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGG 126 | |||||||||| ||||||||||||| ||| ||| ||| ||||||||| || |||||||| Sbjct 122 TGTCCGGAATTATTGGGCGTAAAGGGCGCGCAGGCGGTCTCTTAAGTCTGATGTGAAAGG 181 Query 127 CTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAG 186 | | ||||||||| |||| || || ||||||| || || ||||||||||| || || Sbjct 182 CCACGGCTCAACCGTGGGATGGCATTGGAAACTGGGGGACTTGAGTGCAGGAGAGGGGAG 241 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||| |||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 242 CGGAATTCCCGGTGTAGCGGTGAAATGCGTAGAGATCGGGAGGAACACCAGTGGCGAAGG 301 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGC 277 ||||| |||| ||||||||||| ||||||| Sbjct 302 CGGCTCTCTGGCCTGTAACTGACGCTGAGGC 332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202436701952