Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01002207.1
Length=564
Score E
Sequences producing significant alignments: (Bits) Value
seq30233 221 4e-55
>seq30233
Length=342
Score = 221 bits (244), Expect = 4e-55
Identities = 193/236 (82%), Gaps = 3/236 (1%)
Strand=Plus/Plus
Query 241 CTCCCACCTATCCTACACAAACCG-CACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299
|||||||||||||| ||| | | | || ||| ||| || || ||| ||| ||| |||
Sbjct 108 CTCCCACCTATCCTGTACACATCATCGCCAAAT-CCACTATCAGGCTGCAGTCAAGCTCC 166
Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358
|||||||||| |||| || || | | || | ||||||| || | |||| ||||||||||
Sbjct 167 ACGGGGTCTTTCCGTCTTGTCGTGGGTAATGCGCATCTTCACGCATACTACAATTTCACC 226
Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418
|||||| | |||||||||| |||||||||||| ||||||| ||||||||||||||
Sbjct 227 GGGCCTCTCGTTGAGACAGTGTCCAAGTCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 286
Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 287 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGG 342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1701320014464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |