Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04] 63,439 sequences; 2,073,344,508 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq30233 221 4e-55 >seq30233 Length=342 Score = 221 bits (244), Expect = 4e-55 Identities = 193/236 (82%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 241 CTCCCACCTATCCTACACAAACCG-CACCGAATGCCAATACCAAGCTATAGTGAAGGTCC 299 |||||||||||||| ||| | | | || ||| ||| || || ||| ||| ||| ||| Sbjct 108 CTCCCACCTATCCTGTACACATCATCGCCAAAT-CCACTATCAGGCTGCAGTCAAGCTCC 166 Query 300 -CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACC 358 |||||||||| |||| || || | | || | ||||||| || | |||| |||||||||| Sbjct 167 ACGGGGTCTTTCCGTCTTGTCGTGGGTAATGCGCATCTTCACGCATACTACAATTTCACC 226 Query 359 GGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACC 418 |||||| | |||||||||| |||||||||||| ||||||| |||||||||||||| Sbjct 227 GGGCCTCTCGTTGAGACAGTGTCCAAGTCGTTACGCCTTTCGTGCGGGTCGGAACTTACC 286 Query 419 CGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGG 474 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 287 CGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGG 342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1701320014464