Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinolophus_20sinicus_20[refseq_20GCF_5F001888835.1_202016-12-04]
63,439 sequences; 2,073,344,508 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq7394 434 3e-119
>seq7394
Length=1284
Score = 434 bits (480), Expect = 3e-119
Identities = 334/389 (86%), Gaps = 12/389 (3%)
Strand=Plus/Plus
Query 125 AGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCC 184
||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||
Sbjct 1 AGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTAGGCC 60
Query 185 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC-AA 243
||||||||||||||||||||||||||||||||||||||||||| | ||||| || | ||
Sbjct 61 ACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCAGCACAAA 120
Query 244 GGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGC--CCCGAAG----GGCGTT 297
||||||||||| ||| |||||| |||||||| || |||| | | || ||||
Sbjct 121 GGCCATGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAGAGCCCGCGTC 178
Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCT 356
| ||||||||||||||| | ||||||| ||||||||||||| | ||| |||||||||
Sbjct 179 GACCTTTTATCTAATAAATGCGTCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCT 238
Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416
|||||||||| |||||||||| ||||| || ||| |||||| |||| ||||||||||||
Sbjct 239 CTAGAATTACTACGGTTATCCGAGTAGT-AGTTACCATCAAACAAACTATAACTGATTTA 297
Query 417 ATGAGCCATTCGCAGTTTCACTGTAT-AGATTGCTTATACTTAGACATGCATGGCTTAAT 475
||||||||||||||||||||| || | | ||| | ||||||| ||||||||||||||||
Sbjct 298 ATGAGCCATTCGCAGTTTCACAGTCTGAATTTGTTCATACTTACACATGCATGGCTTAAT 357
Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||
Sbjct 358 CTTTGAGACAAGCATATGACTACTGGCAG 386
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1509441817344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |