Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17]
2,490 sequences; 1,910,250,568 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1841 102 6e-17
seq1669 89.7 4e-13
>seq1841
Length=1603521
Score = 102 bits (112), Expect = 6e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||||||||| || ||||| || ||||| || ||||| || || |||| || || ||
Sbjct 624165 GGTATACTCTACTATTTCTGTACACAGGTTGCTGCATTTGATTGTTCCCAGGTTTTGCTG 624224
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| ||||| || | ||| ||||| | |||||| || || || ||||| ||
Sbjct 624225 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCGGTCTG 624284
Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192
|||||||||||||||| ||||||
Sbjct 624285 AGACTCAATGATGGCGTACCAAAG 624308
>seq1669
Length=5184857
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
|||||||| || || | ||||| || |||||||| || || |||||| ||| ||||||
Sbjct 4058180 CAGGAGGTACAGGTTCCAGAGGCACGCTGTTTCTATGGTTTTCAGATTCTCATCGAGAAT 4058239
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | || || | || |||||||| ||
Sbjct 4058240 GTTCACTCAGAGATGTACAGTTTGCTAATACACACTTACATCAGAGA 4058286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397555935053600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |