Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rousettus_20aegyptiacus_20[refseq_20GCF_5F001466805.2_202016-03-17] 2,490 sequences; 1,910,250,568 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1841 102 6e-17 seq1669 89.7 4e-13 >seq1841 Length=1603521 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| || ||||| || ||||| || || |||| || || || Sbjct 624165 GGTATACTCTACTATTTCTGTACACAGGTTGCTGCATTTGATTGTTCCCAGGTTTTGCTG 624224 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | |||||| || || || ||||| || Sbjct 624225 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTACCTGTCTCGGTCTG 624284 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||||| |||||| Sbjct 624285 AGACTCAATGATGGCGTACCAAAG 624308 >seq1669 Length=5184857 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| || || |||||| ||| |||||| Sbjct 4058180 CAGGAGGTACAGGTTCCAGAGGCACGCTGTTTCTATGGTTTTCAGATTCTCATCGAGAAT 4058239 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || | || |||||||| || Sbjct 4058240 GTTCACTCAGAGATGTACAGTTTGCTAATACACACTTACATCAGAGA 4058286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397555935053600