Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sorex_20araneus_20[refseq_20GCF_5F000181275.1_202012-08-27] 12,845 sequences; 2,423,158,183 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq18 77.0 4e-12 seq3 73.4 5e-11 >seq18 Length=30093284 Score = 77.0 bits (84), Expect = 4e-12 Identities = 81/102 (79%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 |||||||||||| || || |||| |||||||| |||||||| ||| |||| | ||| Sbjct 29211610 AAACCAACAAAACAGA-AC-CACGGTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGC 29211553 Query 69 GTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| ||||| Sbjct 29211552 GGCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 29211511 >seq3 Length=52403620 Score = 73.4 bits (80), Expect = 5e-11 Identities = 78/101 (77%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| | || |||||||| |||||||| ||| |||| | || | Sbjct 44770494 AAACCAACAAAATAGAACCTCA-GTCCTATTTCATTATTCCTAGCTGCAGTATCCAGGTG 44770436 Query 70 T---AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | || ||||||||||||||||||||| |||| ||||| Sbjct 44770435 GCTCAGGCTTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 44770395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595125935730