Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq156 389 1e-105 seq352 385 1e-104 seq17 183 9e-44 seq360 174 5e-41 seq15 149 2e-33 seq9 140 1e-30 seq206 116 1e-23 seq6 111 5e-22 seq19 109 2e-21 seq355 77.0 1e-11 seq8 77.0 1e-11 seq3 75.2 3e-11 >seq156 Length=16266 Score = 389 bits (430), Expect = 1e-105 Identities = 421/556 (76%), Gaps = 58/556 (10%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 7413 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 7354 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7353 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 7294 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 7293 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 7234 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 7233 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 7174 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 ||| | |||||| | | ||||| || ||||||| || ||| Sbjct 7173 GGAGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCACCCC 7114 Query 286 ----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACA-----C 320 ||| || | ||||| |||| |||| |||||| || | Sbjct 7113 CCGGCCGGGGCCGGGGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCATC 7055 Query 321 CCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373 ||| ||||| ||||| | |||||||||||||||||||||||||| ||| Sbjct 7054 CCCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAGTT 6997 Query 374 ATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCG 428 ||||| |||| | || | | | |||| ||| |||||||||||||||||||||||| Sbjct 6996 ATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCG 6937 Query 429 CAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGC 488 ||||||||||||| | | |||||||||||||||||||||||||||||||||||| Sbjct 6936 CAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGC 6877 Query 489 ATATGACTACTGGCAG 504 ||||| |||||||||| Sbjct 6876 ATATG-CTACTGGCAG 6862 >seq352 Length=51932 Score = 385 bits (426), Expect = 1e-104 Identities = 421/558 (75%), Gaps = 60/558 (11%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 7221 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 7280 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7281 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 7340 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 7341 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 7400 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 7401 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 7460 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGCC------ 285 ||| | |||||| | | ||||| || ||||||| || ||| Sbjct 7461 GGAGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCACCCC 7520 Query 286 -----------CCGAAGG----------GCGTTGGTTTTTTATCTAATAAATACA----- 319 ||| || | ||||| |||| |||| |||||| || Sbjct 7521 CCCGGCCGGGGCCGGGGGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCAT 7579 Query 320 -CCCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGG 371 |||| ||||| ||||| | |||||||||||||||||||||||||| | Sbjct 7580 CCCCCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAG 7637 Query 372 TTATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426 ||||||| |||| | || | | | |||| ||| |||||||||||||||||||||| Sbjct 7638 TTATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATT 7697 Query 427 CGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 ||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 7698 CGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAA 7757 Query 487 GCATATGACTACTGGCAG 504 ||||||| |||||||||| Sbjct 7758 GCATATG-CTACTGGCAG 7774 Score = 385 bits (426), Expect = 1e-104 Identities = 421/558 (75%), Gaps = 60/558 (11%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||||| Sbjct 43798 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 43739 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 43738 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 43679 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||| Sbjct 43678 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 43619 Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTC 241 || |||||||||||||||||||||||||| || ||||| | |||||| | | Sbjct 43618 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCGCCAC 43559 Query 242 -AAGGCCATGCGAT--TCGTTAAGTTATTATGAATCACCAA-------GGAGC------- 284 ||| | |||||| | | ||||| || ||||||| || || Sbjct 43558 GGAGGGCGTGCGATCGGCCCGAGGTTATCTAGAGTCACCAAAGCCGCCGGCGCCCACCCC 43499 Query 285 -----------CCCGAAGG---------GCGTTGGTTTTTTATCTAATAAATACA----- 319 || | ||| | ||||| |||| |||| |||||| || Sbjct 43498 CCCGGCCGGGGCCGGGAGGAGGCTGACCGGGTTGG-TTTTGATCTGATAAATGCACGCAT 43440 Query 320 -CCCCTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGG 371 |||| ||||| ||||| | |||||||||||||||||||||||||| | Sbjct 43439 CCCCCCCGCGAAG--GGGGTCAGCGCCCGTCGGCATGTATTAGCTCTAGAATTACCACAG 43382 Query 372 TTATCCATGTAGTA-AG----GTACTATCAAATAAACGATAACTGATTTAATGAGCCATT 426 ||||||| |||| | || | | | |||| ||| |||||||||||||||||||||| Sbjct 43381 TTATCCAAGTAGGAGAGGAGCGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATT 43322 Query 427 CGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAA 486 ||||||||||||||| | | |||||||||||||||||||||||||||||||||| Sbjct 43321 CGCAGTTTCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGAGACAA 43262 Query 487 GCATATGACTACTGGCAG 504 ||||||| |||||||||| Sbjct 43261 GCATATG-CTACTGGCAG 43245 >seq17 Length=63494081 Score = 183 bits (202), Expect = 9e-44 Identities = 196/255 (77%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||| ||||| | |||||||||| Sbjct 63247333 ACTCATTCCAATTACAGGGCCTCGAAAGAGTTCTGTAGTGTTATTTTTCATCACTACCTC 63247274 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | | ||| |||||||||||| |||||||||||||||||| ||||| ||| ||| Sbjct 63247273 ACTGGGAACGGAGTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGTTGTGGAGGCCATTT 63247214 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| |||||||||| || | ||||||| | ||||| | || | | | |||||||||| Sbjct 63247213 CTCAGACTCCCTCTCCAGATTTGAACCCTGACTCCCCATCACTCATGGTCACCATGGTAG 63247154 Query 182 GCCACTATC-CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || | ||||||| ||||||||||||||||| ||| ||| || | || | | Sbjct 63247153 GC-ACAGTGACTACCATTGAAAGTTGATAGGGCAGGCATTCGAAGGAGTTGTTGCTGCCA 63247095 Query 241 CAAGGCCATGCGATT 255 || ||||||| |||| Sbjct 63247094 CAGGGCCATGTGATT 63247080 Score = 183 bits (202), Expect = 9e-44 Identities = 196/255 (77%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||| ||||| | |||||||||| Sbjct 63294308 ACTCATTCCAATTACAGGGCCTCGAAAGAGATCTGTAGTGTTATTTTTCATCACTACCTC 63294249 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | | ||| |||||||||||| |||||||||||||||||| ||||| ||| ||| Sbjct 63294248 ACTGGGAACGGAGTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGTTGTGGAGGCCATTT 63294189 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| |||||||||| || | ||||||| | ||||| | || | | | |||||||||| Sbjct 63294188 CTCAGACTCCCTCTCCAGATTTGAACCCTGACTCCCCATCACTCATGGTCACCATGGTAG 63294129 Query 182 GCCACTATC-CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || | ||||||| ||||||||||||||||| ||| ||| || | || | | Sbjct 63294128 GC-ACAGTGACTACCATTGAAAGTTGATAGGGCAGGCATTCGAAGGAGTTGTTGCTGCCA 63294070 Query 241 CAAGGCCATGCGATT 255 || ||||||| |||| Sbjct 63294069 CAGGGCCATGTGATT 63294055 Score = 183 bits (202), Expect = 9e-44 Identities = 196/255 (77%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||| ||||| | |||||||||| Sbjct 63356554 ACTCATTCCAATTACAGGGCCTCGAAAGAGTTCTGTAGTGTTATTTTTCATCACTACCTC 63356495 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | | ||| |||||||||||| |||||||||||||||||| ||||| ||| ||| Sbjct 63356494 ACTGGGAACGGAGTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGTTGTGGAGGCCATTT 63356435 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| |||||||||| || | ||||||| | ||||| | || | | | |||||||||| Sbjct 63356434 CTCAGACTCCCTCTCCAGATTTGAACCCTGACTCCCCATCACTCATGGTCACCATGGTAG 63356375 Query 182 GCCACTATC-CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || | ||||||| ||||||||||||||||| ||| ||| || | || | | Sbjct 63356374 GC-ACAGTGACTACCATTGAAAGTTGATAGGGCAGGCATTCGAAGGAGTTGTTGCTGCCA 63356316 Query 241 CAAGGCCATGCGATT 255 || ||||||| |||| Sbjct 63356315 CAGGGCCATGTGATT 63356301 Score = 159 bits (176), Expect = 1e-36 Identities = 190/255 (75%), Gaps = 11/255 (4%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||||| | || | |||||| ||||| ||||| | |||||||||| Sbjct 63187632 ACTCATTCCAATTACAGGGCCTCGAAAGAGTTCTGTAGTGTTATTTTTCATCACTACCTC 63187573 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | | ||| |||||||||||| |||||||||||| ||||| ||| ||| Sbjct 63187572 ACTGGGAACGGAGTGGGTAATTTGC--------TGCCTTCCTTGGTTGTGGAGGCCATTT 63187521 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| |||||||||| || | ||||||| | ||||| | || | | | |||||||||| Sbjct 63187520 CTCAGACTCCCTCTCCAGATTTGAACCCTGACTCCCCATCACTCATGGTCACCATGGTAG 63187461 Query 182 GCCACTATC-CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || | ||||||| ||||||||||||||||| ||| ||| || | || | | Sbjct 63187460 GC-ACAGTGACTACCATTGAAAGTTGATAGGGCAGGCATTCGAAGGAGTTGTTGCTGCCA 63187402 Query 241 CAAGGCCATGCGATT 255 || ||||||| |||| Sbjct 63187401 CAGGGCCATGTGATT 63187387 Score = 134 bits (148), Expect = 4e-29 Identities = 133/168 (79%), Gaps = 12/168 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 ||||| |||| | ||| |||| || ||||| || |||| | | | | |||||| Sbjct 63187230 GCATGGATTATCGCTAAGATTATCA--GTTATTCAAGTAGAAGAGGAGCAAGCAATCAAA 63187173 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA--TAGATTGCTTATACT 456 ||| |||||||||||||||||||||| |||||||||||||| | ||| ||||| Sbjct 63187172 GGAACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCTGCTCTGC--ATACT 63187115 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||| |||||| |||||||||| Sbjct 63187114 TAGATATGCATGGCTTAATCTTTGAGACAAACATATG-CTACTGGCAG 63187068 Score = 134 bits (148), Expect = 4e-29 Identities = 133/168 (79%), Gaps = 12/168 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 ||||| |||| | ||| |||| || ||||| || |||| | | | | |||||| Sbjct 63293898 GCATGGATTATCGCTAAGATTATCA--GTTATTCAAGTAGAAGAGGAGCAAGCAATCAAA 63293841 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA--TAGATTGCTTATACT 456 ||| |||||||||||||||||||||| |||||||||||||| | ||| ||||| Sbjct 63293840 GGAACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCTGCTCTGC--ATACT 63293783 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||| |||||| |||||||||| Sbjct 63293782 TAGATATGCATGGCTTAATCTTTGAGACAAACATATG-CTACTGGCAG 63293736 Score = 134 bits (148), Expect = 4e-29 Identities = 133/168 (79%), Gaps = 12/168 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAA 398 ||||| |||| | ||| |||| || ||||| || |||| | | | | |||||| Sbjct 63356144 GCATGGATTATCGCTAAGATTATCA--GTTATTCAAGTAGAAGAGGAGCAAGCAATCAAA 63356087 Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA--TAGATTGCTTATACT 456 ||| |||||||||||||||||||||| |||||||||||||| | ||| ||||| Sbjct 63356086 GGAACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCTCCTCTGC--ATACT 63356029 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||||||||||||||||||||| |||||| |||||||||| Sbjct 63356028 TAGATATGCATGGCTTAATCTTTGAGACAAACATATG-CTACTGGCAG 63355982 Score = 125 bits (138), Expect = 2e-26 Identities = 133/168 (79%), Gaps = 12/168 (7%) Strand=Plus/Minus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAA 402 ||||| |||| | ||| |||| || ||||| || |||| | ||| | | ||| ||| Sbjct 63246923 GCATGGATTATCGCTAAGATTATCA--GTTATTCAAGTAGAAGAGGAGCAAGCAACCAAA 63246866 Query 403 CGA----TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATA-GAT-TGCTTATACT 456 || ||||||||||||||||||||| |||||||||||||| | | ||| ||||| Sbjct 63246865 GGAACCGTAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCTGCTCTGC--ATACT 63246808 Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||| ||||||| ||||||||||||||||| |||||| |||||||||| Sbjct 63246807 TAGATATGCATGCCTTAATCTTTGAGACAAACATATG-CTACTGGCAG 63246761 >seq360 Length=54489 Score = 174 bits (192), Expect = 5e-41 Identities = 191/250 (76%), Gaps = 3/250 (1%) Strand=Plus/Plus Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 ||||||||||| |||| | || | |||||| || ||| ||||| | |||||||||| Sbjct 20913 ACTCATTCCAACTACAGGGCCTCGAAAGAGTCCCGTAGTGTTATTTTTCATCACTACCTC 20972 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121 | | | ||| |||||||||||| |||||||||||||||||| ||||| ||| ||| Sbjct 20973 ACTGGGAACGGAGTGGGTAATTTGCATGCCTGCTGCCTTCCTTGGTTGTGGAGGCCATTT 21032 Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181 ||||| |||||||||| || | ||||||| | ||||| | || | | | |||||||||| Sbjct 21033 CTCAGACTCCCTCTCCAGATTTGAACCCTGACTCCCCATCACTCATGGTCACCATGGTAG 21092 Query 182 GC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || || | ||||||| ||||||||||||||||| ||| ||| || | || | | Sbjct 21093 GCACAGT-GACTACCATTGAAAGTTGATAGGGCAGGCATTCGAAGGAGTTGTTGCTGCCA 21151 Query 241 CAAGGCCATG 250 || ||||||| Sbjct 21152 CAGGGCCATG 21161 Score = 131 bits (144), Expect = 5e-28 Identities = 131/164 (80%), Gaps = 12/164 (7%) Strand=Plus/Plus Query 347 TGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTA-----CTATCAAATAA 401 || |||| | ||| |||| || ||||| || |||| |||| | | | |||| | Sbjct 21322 TGGATTATCGCTAAGATTATCA--GTTATTCAAGTAG-AAGGGAGCAAGCAACCAAAGGA 21378 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATACTTAGA 460 || |||||||||||||||||||||| |||||||||||||| | ||| ||||||||| Sbjct 21379 ACCATAACTGATTTAATGAGCCATTTGCAGTTTCACTGTACCTGCCTGC--ATACTTAGA 21436 Query 461 CATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||| |||||| |||||||||| Sbjct 21437 TATGCATGGCTTAATCTTTGAGACAAACATATG-CTACTGGCAG 21479 >seq15 Length=140412725 Score = 149 bits (164), Expect = 2e-33 Identities = 369/549 (67%), Gaps = 62/549 (11%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||||| |||| ||| |||||||||||| | ||||| | || ||| | | Sbjct 56396106 ACTCATTCCAGCTACAGGACTTGAAAGAGCCCTGTTT---TATTTTTCACCAATACTTTC 56396050 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | ||| | ||||||| |||| |||||||| ||| ||||||||||| |||| || Sbjct 56396049 TCAGGTCAAGGGTGGGTAACTTGCATGCCTGCTGTCTTTCTTGGATGTGGAAGCCATTCT 56395990 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||| |||||||||| |||| |||||| ||||| | |||||| | |||| |||| Sbjct 56395989 CCAGTCTCCCTCTCCAAAATCAAACCCTGATTCCTTATCACCCGTGGTCACCACTATAGG 56395930 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGC-CGGCTC 241 ||| | |||||||| ||| ||||| |||||| | |||||||| |||| | | | Sbjct 56395929 -CACAA--CTACCATCAAAAATTGATTGGGCAGGTACTTGAATGAGTCATCACTATGATA 56395873 Query 242 AAGGCCATGCGATTCG-TTAAGTTATTATGAATCACCAAGG-----AGCCCCG------- 288 ||| ||| ||| | |||||| || | || || | ||||||| Sbjct 56395872 GAGGGTATGTGATCAGCCCGAGTTATCTCGAGTTACAAAAGCCACTAGCCCCGCCCCCAT 56395813 Query 289 ---------AAGGGCG-----TTGG----TTTTTTATCTAATAA----ATACACCCCTTC 326 |||| | ||| ||||| |||| |||| || || ||||| Sbjct 56395812 CCAGGGTCAGAGGGAGACTTAATGGGTAATTTTTGATCTGATAAGTGTATGCATTCCTTC 56395753 Query 327 -CGAA----GTC-GGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATG 380 ||| ||| ||| | | |||||||||||||||||||| | | | |||| ||| | Sbjct 56395752 ATGAAAGTGGTCAGGGATCATCAGCATGTATTAGCTCTAGAACTGCAATAGTTACCCAAG 56395693 Query 381 TAGTA-AGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTC 435 || | |||| | | | || ||| | |||| ||||||||||| ||| ||||||| Sbjct 56395692 TAAAAGAGGTGCAAGGGACCTAAGGAACCACAACTCATTTAATGAGCTATT--CAGTTTC 56395635 Query 436 ACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495 | || ||| |||||||||||||||||| || ||||||||||| || | | || Sbjct 56395634 AGGGT----CATGC--ATACTTAGACATGCATGGTTTCATCTTTGAGACGAGTA-AACAC 56395582 Query 496 TACTGGCAG 504 ||||||||| Sbjct 56395581 TACTGGCAG 56395573 >seq9 Length=139512083 Score = 140 bits (154), Expect = 1e-30 Identities = 120/149 (81%), Gaps = 7/149 (5%) Strand=Plus/Minus Query 35 TGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGC 94 ||||| ||||| | |||||| ||||| | ||||||| ||||||||||| |||||| Sbjct 21160952 TGTATTGTTATTTTTCATCACTATCTCCCTGGGTCGGGAGTGGGTAATTTGTGCGCCT-- 21160895 Query 95 TGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATT 154 ||||||||||||||||| |||||||||||||||||||| ||| ||||||| ||| Sbjct 21160894 -----TCCTTGGATGTGGTAGCTGTTTCTCAGGCTCCCTCTCCAGAAATGAACCCTGATT 21160840 Query 155 CCCCGTTACCCGTTGATACCATGGTAGGC 183 |||| | ||| || | |||||||||||| Sbjct 21160839 CCCCATCACCTGTGGTCACCATGGTAGGC 21160811 Score = 136 bits (150), Expect = 1e-29 Identities = 97/110 (88%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454 |||| ||| ||||||||||||||||||||||||||||||||||||| | || || Sbjct 52114115 CAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCTGTGCGTA 52114174 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 52114175 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATTTG-CTACTGGCAG 52114223 >seq206 Length=35256 Score = 116 bits (128), Expect = 1e-23 Identities = 162/217 (75%), Gaps = 10/217 (5%) Strand=Plus/Plus Query 42 GTATTTATTG--TCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT 99 |||||| || |||||||||| | | | ||| | |||||||||||| |||||||||| Sbjct 148 GTATTTTTTTCATCACTACCTCACTGGGACGG-AGTGGGTAATTTGCCATCCTGCTGCCT 206 Query 100 TCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCG 159 |||| | | ||| ||| |||||||| ||||| |||| || | ||||||| | ||||| Sbjct 207 TCCT--GGTTTGGAGGCCATTTCTCAGACTCCC-CTCCAGATTTGAACCCTGACTCCCCA 263 Query 160 TTACCCGTTGATACCATGGTAGGC-CACTATCCTACCATCGAAAGTTGATAGGGCAGAAA 218 | || | | | |||||||||||| || | ||||||| ||||| ||||||||||| | Sbjct 264 TCACTCATGGTCACCATGGTAGGCACAGT-GACTACCAT-GAAAG-TGATAGGGCAGGCA 320 Query 219 TTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATT 255 || ||| || | || | | || ||||||| |||| Sbjct 321 TTCGAAGGAGTTGTTGCTGCCACAGGGCCATGTGATT 357 >seq6 Length=170843587 Score = 111 bits (122), Expect = 5e-22 Identities = 140/190 (74%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 27 AAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGC 86 ||||| ||||||| ||| | |||||||| |||||| ||| | | ||| ||||||| Sbjct 128756996 AAGAGTCCTGTATTCTTATATTTTGTCACTGCCTCCCTCAGTCAGTAGTGGTTAATTTGT 128756937 Query 87 GCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAA 146 | |||||||||||| ||||| ||||||||| ||||||| | ||| |||| |||||| || Sbjct 128756936 TCCCCTGCTGCCTTCTTTGGAAGTGGTAGCCATTTCTCATGTTCCTTCTCTGGAATCAAA 128756877 Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC-CACTATCCTACCATCGAAAGTT 205 | | || | | | || | |||||| |||| || || || | || |||||| Sbjct 128756876 CTATGATCCTGCATCTTTTGTGGTCACCATGTGAGGCACAGTA-ACTGCATTCAAAAGTT 128756818 Query 206 GATAGGGCAG 215 |||||||||| Sbjct 128756817 GATAGGGCAG 128756808 Score = 95.1 bits (104), Expect = 4e-17 Identities = 129/171 (75%), Gaps = 12/171 (7%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATC---CATGTAGTAAGGTACTA--TCAA 397 |||||||||||||||||||||||| | |||||| || ||| | | | | | | Sbjct 128756371 AGCATGTATTAGCTCTAGAATTACAA--GTTATCATCCAAATAGGACAGGAATGGGTGAC 128756314 Query 398 ATAAACGAT-AACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTA-T 453 || ||| ||| ||||| ||||||||| ||||||||||||| | || ||| || | Sbjct 128756313 CAAAGGGATTAACCAATTTACTGAGCCATTTGCAGTTTCACTGTCTCAGCCATGCATACT 128756254 Query 454 ACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| |||| ||||||||||||||||||| ||| ||||||| || Sbjct 128756253 TGTTAGACATACATGCTTTAATCTTTGAGACAAGCAAATG-CTACTGGTAG 128756204 >seq19 Length=125939595 Score = 109 bits (120), Expect = 2e-21 Identities = 128/169 (76%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 341 TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACT----ATC 395 || ||| |||||| ||| |||| |||||| ||| || | |||| | ||| || | | Sbjct 97611068 TTGGCAGGTATTAACTCCAGAAGTACCACAGTTCTCAAAGTAGGAGAGGAGCTGGCAACC 97611009 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 ||| ||| |||||||||||||||||||||| |||||||||||| | | | ||| Sbjct 97611008 AAAGGAACCATAACTGATTTAATGAGCCATTGGCAGTTTCACTGCAGTGGCCGTGCGTAC 97610949 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||| | ||||||| ||| || | |||||| ||| Sbjct 97610948 TTAGACATGCATGGCTTCACCTTTGAG--GAGCCTACG-CTACTGCCAG 97610903 >seq355 Length=383558 Score = 77.0 bits (84), Expect = 1e-11 Identities = 100/137 (73%), Gaps = 1/137 (1%) Strand=Plus/Minus Query 5 TCATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCC 63 ||||| || ||||| || ||||| || ||||| ||| | | ||||||||| | Sbjct 160396 TCATTTCAGTTACATAGCTTCAAAAAAGTCCTGTGCTTTTATATTATATCACTACCTTTC 160337 Query 64 CGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCT 123 || | | ||| ||||||| | |||||||||||||||||||| |||||| ||||| Sbjct 160336 TCAGTGAGTAGTGGTGAATTTGCACACCTGCTGCCTTCCTTGGATGATGTAGCCATTTCT 160277 Query 124 CAGGCTCCCTCTCCGGA 140 || |||||| || ||| Sbjct 160276 AAGTCTCCCTTTCTGGA 160260 >seq8 Length=138966237 Score = 77.0 bits (84), Expect = 1e-11 Identities = 93/124 (75%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 8 TTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGT 66 ||||||||||| | | ||| || || |||| ||||| |||||||||||| | Sbjct 50113278 TTCCAATTACAGGGCATCAAGTCAGTCCAGTATTTTTATTTTCCATCACTACCTCCCTGC 50113219 Query 67 GTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAG 126 | ||| ||||||||||| | ||||||| ||||||| |||||||||| |||| |||| Sbjct 50113218 ATTTGGAGTGGGTAATTTG-ACATCTGCTGCTTTCCTTGTATGTGGTAGCTGTTTTTCAG 50113160 Query 127 GCTC 130 ||| Sbjct 50113159 ACTC 50113156 >seq3 Length=132848913 Score = 75.2 bits (82), Expect = 3e-11 Identities = 79/103 (77%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCC-AAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61 |||||||||||||| | | | |||| || ||||| | | | ||| ||||||||||||| Sbjct 110416911 ACTCATTCCAATTATAGGGCATTAAAAAAGTCCTGTCTTATTCTTTTTTGTCACTACCTC 110416852 Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTT 104 ||| || ||| || |||||||| || ||| |||| ||||| Sbjct 110416851 CCCAGATCAGGAGTGAGTAATTTGTGCACCTATTGCCATCCTT 110416809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510390741248