Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sus_20scrofa_20[refseq_20GCF_5F000003025.6_202017-02-07] 613 sequences; 2,501,912,388 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq8 84.2 8e-11 >seq8 Length=138966237 Score = 84.2 bits (92), Expect = 8e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 364423 ACCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCC 364482 |||||| |||||||||||||| |||| | | |||||||||||||||||||| ||||| Sbjct 56277988 ACCAATCGTCATACGAGAGGGGATGGCGTGGGGGTTGATGATGATGTCAGGGGTGATGCC 56277929 Query 364483 GTCAGCGGTAAAGGGCATATC 364503 ||| ||| || |||||||| Sbjct 56277928 TTCACAGGTGAAAGGCATATC 56277908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884871595984409