Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq23817 203 6e-50
seq23818 170 4e-40
>seq23817
Length=2840
Score = 203 bits (224), Expect = 6e-50
Identities = 241/324 (74%), Gaps = 7/324 (2%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||||||| |||||| ||| | || ||||| | |||||||| || | |||
Sbjct 2322 AGGGGAGTGAAATAGATCCTGAAACCGTGTGCATACAAACAGTCGGAGCGGACTTGTTCC 2263
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
|||||||||| ||||||| |||||| | | ||| ||| ||| ||||||||||
Sbjct 2262 GTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTACAT-TCAGTGGCGAGGTTAACC 2204
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190
| | || ||||| || |||| |||| | ||||||||||| ||| | |||
Sbjct 2203 GAATAGGGG-----AGCCGTAGAGAAATCGAGTCCGAACAGGGCGAC-AGTCGCTGGGTG 2150
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||| ||||||| |||||||||||| | |||| ||||| |||||||| || |||
Sbjct 2149 TAGACCCGAAACCAGGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGG 2090
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||| ||||||| || |||||||| || |||||| | |||||||||||||||||
Sbjct 2089 AGGTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGC 2030
Query 311 CAATCAAACTGGGAAATAGCTCGT 334
|| ||||| |||||||||| ||
Sbjct 2029 TAAACAAACCTGGAAATAGCTGGT 2006
>seq23818
Length=1185
Score = 170 bits (188), Expect = 4e-40
Identities = 255/349 (73%), Gaps = 26/349 (7%)
Strand=Plus/Minus
Query 1 TAGCCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCC 60
|| |||| | ||||| ||||||||| |||||| ||| | |||||||||| || |||||
Sbjct 670 TACCCCGGG-AGGGGAGTGAAATAGTACCTGAAACCGTGTGCCTACAAGCCGTGAGAGCC 612
Query 61 G-AGTGA-TTCGGTGACGG--------CGTGCCTTTTGCATAATGAGCCTACGAGTTAGT 110
||| ||||| | ||| ||||||||||| | ||||||||| |||||||||
Sbjct 611 TTAGTTCCTTCGGGGGCGGGGTGATTGCGTGCCTTTTGAAGAATGAGCCTGCGAGTTAGT 552
Query 111 CGTCACCAGCGAGGTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACA 170
|| || | | | |||| | | || | |||||| || ||||||||| | ||||
Sbjct 551 GGT-ACGTG-GCGTTTAACC-CGTGGGG---GGTAGCCGTAGCGAAAGCGAGTCCGAACA 498
Query 171 GGGCGAC-GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGA 229
||||| |||| | || |||||| |||| || |||||||||||| | ||||||||
Sbjct 497 GGGCGTTTGAGTCGCGTGCCCTAGACCCGAAGCCGAGTGATCTACCCATGGCCAGGTTGA 438
Query 230 AGTCGCGG-TAA---CGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGA 285
|| ||||| ||| |||||| |||||||||||| | |||||||| | |||
Sbjct 437 AG-CGCGGGTAAGACCGCGTG---GAGGACCGAACCCACTTAGGTTGAAAACTGAGGGGA 382
Query 286 TGACTCGCGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334
||| | ||||||||||||||||||||||||||| || |||||| ||
Sbjct 381 TGAGCTGTGGGTAGGGGTGAAAGGCCAATCAAACTCGGTGATAGCTGGT 333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972568288768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |