Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01000370.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq23817 98.7 9e-19 >seq23817 Length=2840 Score = 98.7 bits (108), Expect = 9e-19 Identities = 137/187 (73%), Gaps = 9/187 (5%) Strand=Plus/Minus Query 2 GCAGACGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGC 61 ||| | ||||||||||| ||| | |||||| ||||||||| || ||||| |||| Sbjct 2787 GCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGC 2728 Query 62 TACGGGGATTG-GCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATA 120 | |||||| || ||| | || |||||||| |||| ||||||||||| |||||| Sbjct 2727 TGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCT 2668 Query 121 TTGGAGATATATCAT----AACGC-TAGGC--GTTAGGCGAACGTGGGGAACTGAAACAT 173 |||| | || ||| || | ||||| | | ||||||| || |||||||||||| Sbjct 2667 TTGG-GTCATTGCATGCTGAATACATAGGCATGCAAAGCGAACGCGGCGAACTGAAACAT 2609 Query 174 CTAAGTA 180 ||||||| Sbjct 2608 CTAAGTA 2602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476689980039