Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq23817 78.8 1e-12 seq22443 77.0 3e-12 >seq23817 Length=2840 Score = 78.8 bits (86), Expect = 1e-12 Identities = 78/100 (78%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| || | || | ||| ||| |||||||||||||| ||| || | Sbjct 1227 CGCAAACCGACACAGGTGGGCGAGATGAGTATTCTAAGGCGCTTGAGAGAACTCGGGAGA 1168 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGG 121 ||||||| |||||| || | |||||||||||| ||||| Sbjct 1167 AGGAACTCGGCAAATTGGTACCGTAACTTCGGGA-AAAGG 1129 >seq22443 Length=335 Score = 77.0 bits (84), Expect = 3e-12 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| || | | || ||| || |||||||||||||| ||| ||| | Sbjct 250 CGTAAACCGACACAGGTGGGCAGGATGAGAATTCTAAGGCGCTTGAGAGAACTCGGGTGA 191 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||||| | | | |||||||||||| || Sbjct 190 AGGAACTAGGCAAAATAGCACCGTAACTTCGGGAGAA 154 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531077427426