Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= AAMG01000636.1
Length=426
Score E
Sequences producing significant alignments: (Bits) Value
seq22443 241 3e-61
seq23817 194 4e-47
>seq22443
Length=335
Score = 241 bits (266), Expect = 3e-61
Identities = 194/235 (83%), Gaps = 17/235 (7%)
Strand=Plus/Plus
Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 7 GCTAACCCCATCACTTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 66
Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300
||||||||||||||||||||||||||| |||||||||||||| || | | | | |||
Sbjct 67 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACC 126
Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360
||| || || || || | ||||||||||||||||||||||||
Sbjct 127 --------CTTTCG--------CCCTC-CCAAAAAGGGCGCACCTTCTCCCGAAGTTACG 169
Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||| ||||||||||||||||| |||||||||||||||||||||| | ||||||
Sbjct 170 GTGCTATTTTGCCTAGTTCCTTCACCCGAGTTCTCTCAAGCGCCTTAGAATTCTC 224
>seq23817
Length=2840
Score = 194 bits (214), Expect = 4e-47
Identities = 174/216 (81%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 202 TCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTG 261
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 987 TCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTG 1046
Query 262 TTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAG 321
|||||| |||||||||||||| || | | | | ||| | || || || ||
Sbjct 1047 TTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCTTTCGCCCTCACACAGTAAA 1106
Query 322 TCCTTCACCCTCACC--GGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTC 379
||| || ||| |||| ||||| ||||||||||||||| || |||||| |||||
Sbjct 1107 GTGATCAAGCT-ACCGGGGCGTACCTTTTCCCGAAGTTACGGTACCAATTTGCCGAGTTC 1165
Query 380 CTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415
|||| |||||||||||||||||||||| | || |||
Sbjct 1166 CTTCTCCCGAGTTCTCTCAAGCGCCTTAGAATACTC 1201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1260499690048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |