Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq125 149 3e-34 seq198 75.2 5e-12 >seq125 Length=3337254 Score = 149 bits (164), Expect = 3e-34 Identities = 94/102 (92%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 20877 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGAAAGAGCCCAGCG 20818 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | ||||||||||||| ||||||| |||||| ||| || ||| Sbjct 20817 CTGAATCCCCGCCCCATGGTGGGGTGCGGGAAATGCGGTGTA 20776 >seq198 Length=19200852 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||| ||| || |||||||||||||||| |||| | || |||||| |||| | Sbjct 2898180 AGGATTCCCTCA-TAAAGGGGAGTGAACAGGGAAGATCCCACCACCAAATCCCTGCCCTG 2898238 Query 77 CGGTGGGG 84 ||||||| Sbjct 2898239 TGGTGGGG 2898246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230348550960