Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq22443 105 1e-20 seq23817 73.4 8e-11 >seq22443 Length=335 Score = 105 bits (116), Expect = 1e-20 Identities = 136/186 (73%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 188 CTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGA 247 ||||||||||||||||||||||||||||| ||||||| || ||| || || ||||| Sbjct 20 CTTAACCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGA 79 Query 248 AACCTGTGTTTTTGGTAAACAGTCGCTTGGGCC----TATT-----CTCTGCGGCCTGTC 298 |||||||||| ||||||||||| || |||| | | || ||| | Sbjct 80 GTGCTGTGTTTTTATTAAACAGTCGCAGCCACCAGTTTATTGCAACCCTTTCGCCCTCCC 139 Query 299 ATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATA 358 | | | ||| | ||||||||| ||||||||| | |||||||| |||||||| || | Sbjct 140 A-AAAAGGGCGCACCTTCTCCCGAAGTTACGGTGCTATTTTGCCTAGTTCCTTCACCCGA 198 Query 359 GTTCTC 364 |||||| Sbjct 199 GTTCTC 204 >seq23817 Length=2840 Score = 73.4 bits (80), Expect = 8e-11 Identities = 63/78 (81%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 196 TCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAGCAGAAACCTGTG 255 ||||||||||||||||||||| ||||||| || ||| || || ||||| ||||| Sbjct 987 TCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTG 1046 Query 256 TTTTTGGTAAACAGTCGC 273 ||||| ||||||||||| Sbjct 1047 TTTTTATTAAACAGTCGC 1064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062146946944