Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq23818 724 0.0
seq23817 338 2e-90
>seq23818
Length=1185
Score = 724 bits (802), Expect = 0.0
Identities = 522/599 (87%), Gaps = 14/599 (2%)
Strand=Plus/Plus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||||||| | |||| || ||||||||||||| ||| ||||||||||| ||||||||||
Sbjct 181 TCGACTACGAACCTTA-TCGCCCGCAGTCTCACTGCCACGCTCTCACTTACCGGCATTCG 239
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGTGCTCTACCTCCG 120
|||||||| ||| || |||| |||||||| ||| ||| |||||||||||||
Sbjct 240 GAGTTTGGCTGACGTCAGTAACCTTGTGGGGCCC-------ATC---TGCTCTACCTCCG 289
Query 121 GGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGT 180
| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 290 GCAAGAAACACGTGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACCGAGT 349
Query 181 TTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 240
||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct 350 TTGATTGGCCTTTCACCCCTACCCACAGCTCATCCCCTCAGTTTTCAACCTAAGTGGGTT 409
Query 241 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTC 300
|||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||
Sbjct 410 CGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGGCCATGGGTAGATCACTCGGCTTC 469
Query 301 GGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCA 360
|||||| | | || ||||| ||||||| |||||||||||||||||||||||||||||
Sbjct 470 GGGTCTAGGGCACGCGACTCAAACGCCCTGTTCGGACTCGCTTTCGCTACGGCTACCCCC 529
Query 361 CACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCG 420
|||||||||| ||| || | | | |||||||||||||||||||||||||||||||
Sbjct 530 CACGGGTTAA--ACGCCACGTACCACTAACTCGCAGGCTCATTCTTCAAAAGGCACGCAA 587
Query 421 TCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTA 480
||||| | || |||| ||| |||| |||| ||||||||||| |||||||||||
Sbjct 588 TCACCCCG-CCCCCGAAGGAACTAAGGCTCTCACGGCTTGTAGGCACACGGTTTCAGGTA 646
Query 481 CTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATC 540
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 647 CTATTTCACTCCCCTCCCGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATC 706
Query 541 GGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
|||||||| |||||| ||||||| |||||||||||||||||||||||| |||||||
Sbjct 707 GGTCACCAGTCAGTATTCAGGCTTAGCGGGTGGTCCCGCCAGATTCACACCGAATTTCA 765
>seq23817
Length=2840
Score = 338 bits (374), Expect = 2e-90
Identities = 352/457 (77%), Gaps = 15/457 (3%)
Strand=Plus/Plus
Query 142 ACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTA 201
|||||||| |||||| ||||||||||||| | | ||||| || ||||||||||||||
Sbjct 1984 ACCTAAATAGTTTTCGGAGAGAACCAGCTATTTCCAGGTTTGTTTAGCCTTTCACCCCTA 2043
Query 202 TCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTAC 261
|||||| ||||||||| | |||||||| | ||||||||||| |||||| | || ||||
Sbjct 2044 CCCACAGCTCATCCCCTAATTTTTCAACATTAGTGGGTTCGGACCTCCAGGGCGTGTTAC 2103
Query 262 CCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCA 321
| ||||| |||| |||||| |||||||| | | ||||||||| | | || |||
Sbjct 2104 CGCACCTTCATCCTGGCCATGGGTAGATCACCTGGTTTCGGGTCTACACCCAGCGACT-- 2161
Query 322 TACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACAC 381
|||||| |||||||||| |||| |||||||| ||| | | |||||||||||| ||
Sbjct 2162 GTCGCCCTGTTCGGACTCGATTTCTCTACGGCTCCCCTATTC-GGTTAACCTCGCCACTG 2220
Query 382 AACGCAAACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCA 441
|| | || |||| | | |||| | ||||||| |||||||||| || || |||
Sbjct 2221 AATG-TAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCAC--GGAAC----AAG--- 2270
Query 442 CTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGG 501
|| |||||||| | ||||| ||||| ||||||||| |||||||||||||| || |||
Sbjct 2271 --TCCGCTCCGACTGTTTGTATGCACACGGTTTCAGGATCTATTTCACTCCCCTCCCGGG 2328
Query 502 GTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGG 561
|| |||||| |||||||||||||||||| || | ||||||||| || |||||||||
Sbjct 2329 GTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCGGTCAGTAGTATTTAGC 2388
Query 562 CTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTC 598
||| || ||||||| ||| |||| || |||||
Sbjct 2389 CTTGGAGGATGGTCCCCCCATGTTCAGACAGGATTTC 2425
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817167065856
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |