Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq22515 91.5 9e-17
seq19044 77.0 2e-12
seq125 77.0 2e-12
>seq22515
Length=1729
Score = 91.5 bits (100), Expect = 9e-17
Identities = 75/86 (87%), Gaps = 4/86 (5%)
Strand=Plus/Plus
Query 39 TCCGAAAGTTCTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAG 98
|||||| | |||||||| |||| || ||||||||| ||||||||||| ||||||||||
Sbjct 131 TCCGAAGGC-CTCACTAAATCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAG 187
Query 99 GGCAGGGACGTAATACAACGCAAGCT 124
||||||||| |||| |||||||||||
Sbjct 188 GGCAGGGACTTAAT-CAACGCAAGCT 212
>seq19044
Length=2450392
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| |||| | |||| |||||||||||||||||||
Sbjct 2386286 CTCACTAAACCATG-CAATCGGTAGTA-GCGATGAGCGGTGTGTACAAAGGGCAGGGACT 2386229
Query 109 TAATACAACGCAAGCT 124
|||| |||| ||||||
Sbjct 2386228 TAAT-CAACACAAGCT 2386214
>seq125
Length=3337254
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| ||| ||||||| | |||| |||| |||||||||||||||||||
Sbjct 23845 CTCACTAAACCATCCAATT-GGTAGTA-GTGACGTGCGGTGTGTACAAAGGGCAGGGACT 23902
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 23903 TAAT-CAACGCAAGCT 23917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300732830420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |