Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq125 73.4 5e-11 seq124 73.4 5e-11 >seq125 Length=3337254 Score = 73.4 bits (80), Expect = 5e-11 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 ||||||||||||||| || |||| |||||||| |||||||| ||| |||| | ||| Sbjct 24681 AAACCAACAAAATAGA-AC-CACGGTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGC 24738 Query 69 G---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| ||||||||||| |||||||| |||| ||||| Sbjct 24739 AGCTTGGGCCCGCTTTGAACACCCTAATTTTTTCAAAGTAAA 24780 >seq124 Length=16471106 Score = 73.4 bits (80), Expect = 5e-11 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACG-TCCTATTCTATTATTCCATGCTAATGTATTCGGGC 68 ||||||||||||||| || |||| ||| |||| |||||||| ||| |||| | ||| Sbjct 416260 AAACCAACAAAATAGA-AC-CACGGTCCCATTCCATTATTCCTAGCTGCGGTATCCAGGC 416317 Query 69 GTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | | |||||||||||||||||||||| |||| ||||| Sbjct 416318 GGCTCGGGTCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 416359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595062659646