Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq5378 82.4 1e-13 >seq5378 Length=283 Score = 82.4 bits (90), Expect = 1e-13 Identities = 129/182 (71%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| || | ||||||| | |||| | |||||||||| ||||| Sbjct 183 CCCACGCTTTCGTGCATGAGCGTCAATCTTGACCCAGGGGGCTGCCTTCGCCATCGGTGT 124 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCT-CCAGCA 119 |||||| || |||||||||||||| ||||||| ||||||| ||||| |||| | Sbjct 123 TCCTCCACATCTCTACGCATTTCACTGCTACACGTGGAATTCTACCCCCCTCTGCCAG-A 65 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| |||| || || ||| |||||||||| | |||||| || ||| Sbjct 64 TTCAAGCCTTGCAGTCTCCAACGCAATTCCCAGGTTGAGCCCGGGGCTTTCACGTCAGAC 5 Query 180 TT 181 || Sbjct 4 TT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828608757249