Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq5378 208 2e-51 >seq5378 Length=283 Score = 208 bits (230), Expect = 2e-51 Identities = 195/247 (79%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 109 TAAGTCAGAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTA 168 |||||| || ||||||| | ||||||||| || | ||| || || |||||| |||| Sbjct 2 TAAGTCTGACGTGAAAGCCCCGGGCTCAACCTGGGAATTGCGTTGGAGACTGCAAGGCTT 61 Query 169 GAGT---GCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAG 225 || | |||| |||| || ||||||| ||||||| |||||||||||||| || | Sbjct 62 GAATCTGGCAGAGGGGG---GTAGAATTCCACGTGTAGCAGTGAAATGCGTAGAGATGTG 118 Query 226 GAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGC 285 |||||||||| |||||||||| || |||| | |||| || | || ||||||| Sbjct 119 GAGGAACACCGATGGCGAAGGCAGCCCCCTGGGTCAAGATTGACGCTCATGCACGAAAGC 178 Query 286 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGG 345 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct 179 GTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGTCTACTAGT 238 Query 346 TGTCGGG 352 ||||||| Sbjct 239 TGTCGGG 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202913409792