Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq23817 435 6e-120 seq23818 132 9e-29 >seq23817 Length=2840 Score = 435 bits (482), Expect = 6e-120 Identities = 243/244 (99%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2790 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 2731 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2730 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 2671 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 2670 CCTTTGGGTCATTGCATGCTGAATACATAGGCATGCAAAGCGAACGCGGCGAACTGAAAC 2611 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2610 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 2551 Query 241 GGGA 244 |||| Sbjct 2550 GGGA 2547 >seq23818 Length=1185 Score = 132 bits (146), Expect = 9e-29 Identities = 162/219 (74%), Gaps = 8/219 (4%) Strand=Plus/Minus Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGA 90 || ||||||||||||||| || |||||||||| ||||||| ||| | | |||| Sbjct 1182 AGCCGATGAAGGACGTAGGAGGCTGCGATAAGCCTCGGGGAGCTGTCAACCGAGCGTTGA 1123 Query 91 TCCGCAGATTTCCGAATGGGGAAACCCGGCCC------TTTGG-GTCATTGCATGCTGAA 143 |||| ||||||||||||||| ||||| || | | ||| || | ||||| Sbjct 1122 TCCGAGGATTTCCGAATGGGGGAACCCCGCACCAGTCATGTGGTGTGACCCGCGCCTGAA 1063 Query 144 TACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAG 202 ||||||| || || ||||| || ||| |||||||||| |||| | |||||| || Sbjct 1062 CACATAGGGCGTGTGGAGGGAACGTGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAG 1003 Query 203 AAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 ||| |||||| |||||| ||||||||||||||||||| Sbjct 1002 AAAACAACCGTGATTCCGTGAGTAGTGGCGAGCGAAATG 964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918181246304