Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09]
23,819 sequences; 2,301,379,344 total letters
Query= AAMG01002194.1
Length=319
Score E
Sequences producing significant alignments: (Bits) Value
seq23817 435 6e-120
seq23818 132 9e-29
>seq23817
Length=2840
Score = 435 bits (482), Expect = 6e-120
Identities = 243/244 (99%), Gaps = 0/244 (0%)
Strand=Plus/Minus
Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2790 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 2731
Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2730 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 2671
Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2670 CCTTTGGGTCATTGCATGCTGAATACATAGGCATGCAAAGCGAACGCGGCGAACTGAAAC 2611
Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2610 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 2551
Query 241 GGGA 244
||||
Sbjct 2550 GGGA 2547
>seq23818
Length=1185
Score = 132 bits (146), Expect = 9e-29
Identities = 162/219 (74%), Gaps = 8/219 (4%)
Strand=Plus/Minus
Query 31 AGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAGTGAGCAAACACACTTTGA 90
|| ||||||||||||||| || |||||||||| ||||||| ||| | | ||||
Sbjct 1182 AGCCGATGAAGGACGTAGGAGGCTGCGATAAGCCTCGGGGAGCTGTCAACCGAGCGTTGA 1123
Query 91 TCCGCAGATTTCCGAATGGGGAAACCCGGCCC------TTTGG-GTCATTGCATGCTGAA 143
|||| ||||||||||||||| ||||| || | | ||| || | |||||
Sbjct 1122 TCCGAGGATTTCCGAATGGGGGAACCCCGCACCAGTCATGTGGTGTGACCCGCGCCTGAA 1063
Query 144 TACATAGGTA-TGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAG 202
||||||| || || ||||| || ||| |||||||||| |||| | |||||| ||
Sbjct 1062 CACATAGGGCGTGTGGAGGGAACGTGGGGAAGTGAAACATCTCAGTACCCACAGGAAGAG 1003
Query 203 AAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241
||| |||||| |||||| |||||||||||||||||||
Sbjct 1002 AAAACAACCGTGATTCCGTGAGTAGTGGCGAGCGAAATG 964
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918181246304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |