Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq63 143 2e-29 seq81 95.1 1e-14 seq1 82.4 6e-11 >seq63 Length=14173813 Score = 143 bits (158), Expect = 2e-29 Identities = 361/539 (67%), Gaps = 15/539 (3%) Strand=Plus/Plus Query 61399 TTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGG 61458 ||||||||||||||||| || || || ||| ||| || |||||||| || |||| Sbjct 113346 TTCAATGCCATCGAGACAATGCCTTGTGTAAAGAAGAAGGCAGATTGGGCTTTGCGTTGG 113405 Query 61459 ATCACCAGTACAA--CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGG 61516 || | |||| |||||| | ||| ||||| | |||| ||||| || || | Sbjct 113406 AT--TGGGGACAAAGAGGCTACCTATGGAGAACGGGTTGTGGCCTTTGCCACTGTGGAAG 113463 Query 61517 GTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGC 61576 | | || || ||| || ||||| | || || ||||| ||||| ||||| || |||| Sbjct 113464 GAATCTTCTTTTCTGGTTCTTTTGCGTCGATATTCTGGTTCAAGAATCGTGGCCTGATGC 113523 Query 61577 CCGGTCTGACCTTCAGCAATG-AGTTGATATCACGCGACGAGGGCATGCATTGTGATTTT 61635 | || || || || ||||| | || || || | || |||||| | || ||||| ||| Sbjct 113524 CTGGCCTCACATTTTCCAATGAACTTATTAGCA-GAGATGAGGGCTTACACTGTGACTTT 113582 Query 61636 GCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAG 61695 || || | ||||||| | ||||| || || || ||| || | ||| | || Sbjct 113583 GCCTGCCTGATGTTCAAAC---ACCTGGTCCATAAACCTTCTGAGCAGAGAGTGAGGGAA 113639 Query 61696 ATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCA 61755 || || | || | ||| | |||||||| || | || || |||||||| Sbjct 113640 ATCATTATCAATGCCATTCAGATCTAGCAGGAATTCCTCATGGAGGCCTTGCCCGTGAAG 113699 Query 61756 CTCATCGGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTG 61815 ||||| || | |||||| ||||| ||| |||||||| ||||| || ||||| || Sbjct 113700 CTCATTGGGACGAATTGCACGTTAATGAAGCAATATATTGAGTTTGTGGCAGACCGACTT 113759 Query 61816 TTGGTCGATTTGGGTATGAAGC--GGATCT-ATAATACGAAAAACCCATTTGATTTCATG 61872 || | || | ||| | ||| || | | | | || |||| |||||||| || ||| Sbjct 113760 ATGCTGGAGCTAGGT-TTTAGCAAGGTTTTCAGAGTA--GAAAATCCATTTGACTTTATG 113816 Query 61873 GACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 | | ||||| ||||| || ||||| || || || ||||| | ||||| || ||||| Sbjct 113817 TAGAATATTTCACTGGAAGGGAAGACTAACTTCTTTGAGAATAGAGTAGGTGAGTATCA 113875 >seq81 Length=24260673 Score = 95.1 bits (104), Expect = 1e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 |||||||| || || | ||||| || |||||||| ||||| || ||| ||| |||||| Sbjct 5368123 CAGGAGGTACAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 5368064 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 5368063 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 5368017 >seq1 Length=9663177 Score = 82.4 bits (90), Expect = 6e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347 || || || |||||||| |||||||| ||||||||||| || |||| || ||||||||| Sbjct 2452339 GAAGCCCGGTGTTTCTATGGCTTCCAAATTGCCATGGAAAACATCCATTCTGAGATGTAC 2452280 Query 61348 AGTGTTCTCATCGATACGTACAT 61370 ||| | ||||| || || ||||| Sbjct 2452279 AGTCTCCTCATTGACACATACAT 2452257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397452588370160