Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ursus_20maritimus_20[refseq_20GCF_5F000687225.1_202014-05-09] 23,819 sequences; 2,301,379,344 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq71 89.7 2e-12 seq131 84.2 9e-11 >seq71 Length=8522002 Score = 89.7 bits (98), Expect = 2e-12 Identities = 99/132 (75%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | ||||| |||||||||||||||||||| | || || ||| |||| || Sbjct 2273685 CTCCTTGAGGCGGGGCACACCCAGGGTCACGTTCTTGGCAGACACACCAGCATAGTGAAA 2273626 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | | ||||| ||| ||| || || |||| | |||| | || ||| ||| || Sbjct 2273625 GGTGTTCAAGGTCATCTGGGTGGCTGGTTCTCCGAGGGACTGTGCGGCCAGGGCGCCCAC 2273566 Query 349204 CATCTCGCCGGG 349215 |||||| || || Sbjct 2273565 CATCTCCCCAGG 2273554 >seq131 Length=32902730 Score = 84.2 bits (92), Expect = 9e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 349073 GCGTCGAGAATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCG 349132 |||| || ||||| |||| | ||||| |||||||| | |||| ||| || ||||| Sbjct 17111424 GCGTTGATGATCTCTTTGATCCGGGGCACACCCAGGGTGATGTTCATGGAGGCCACGCCC 17111483 Query 349133 GCAAAGTGGAAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGG 349186 ||||||||||| |||| ||||||| ||| ||| ||||| || |||| |||| Sbjct 17111484 GCAAAGTGGAAAGTCTTCAGGGTCATCTGGGTGCCTGGCTCACCAATGCTCTGG 17111537 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084087459710562