Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq22624 168 1e-39 seq54402 129 9e-28 seq137294 84.2 3e-14 >seq22624 Length=765 Score = 168 bits (186), Expect = 1e-39 Identities = 198/259 (76%), Gaps = 9/259 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||||| Sbjct 320 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATTTC 262 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 261 -TCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 203 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 ||||| |||| ||| ||| |||| || || ||| |||||||||||| |||| Sbjct 202 ACCCGCGCCTGCTGGCATAGG--ATAGGCACACGCTGAGCCAGTCAGTGTAGCGCACGTG 145 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 | |||| | |||||||||||||||||||||||||||||| ||||| ||| || | || | Sbjct 144 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTTGTGTAGGCTGA 86 Query 238 AAGGC-CATCTCCCTCGAA 255 | | | | | |||||| || Sbjct 85 ATGCCACTTGTCCCTCTAA 67 >seq54402 Length=545 Score = 129 bits (142), Expect = 9e-28 Identities = 169/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 6 AAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGT 65 |||||||||||| | ||||||| ||||| ||||| ||| ||| || |||||| |||||| Sbjct 372 AAGGGCAGGGACTTCATCAACGCAAGCTT-ATGACCCGCACTTCCTGGGAATT-CCTCGT 315 Query 66 TGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGAT-TACCCG 124 | | || | ||||||| | ||||||||||||| ||||| | |||||| Sbjct 314 TCCTGGGGAAGAGTTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGCTACCCG 255 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 |||| |||| ||| | | || ||| |||||||||||||||||| |||| Sbjct 254 CGCCTGCCGGCGTAGGGTAGGCGCACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCC 195 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | ||| |||||||||||||||||||||| ||| ||||| || | |||| Sbjct 194 GGACACCTAAGGGCATCACAGACCTGTTGTTG-CTCAAGCTCGCCTGGC 147 >seq137294 Length=355 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||| |||| | ||| |||||||||||||||||||||| | ||| | Sbjct 66 TCAGTGTAGCGCGCGTGCAGCCCCGGACACCTAAGGGCATCACAGACCTGTTGTGGCC-C 124 Query 221 AAACTTCCGTGGC 233 || || |||||| Sbjct 125 AATCTCGCGTGGC 137 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 749984058375