Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq374 246 9e-63 >seq374 Length=747316 Score = 246 bits (272), Expect = 9e-63 Identities = 351/485 (72%), Gaps = 28/485 (6%) Strand=Plus/Plus Query 15 TGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGA 74 |||||||||||| |||||||||||||| | ||||| |||||||||||| | ||||||||| Sbjct 308420 TGAAACTCAAAGAAATTGACGGGGACCTGAACAAGTGGTGGAGCATGTTGCTTAATTCGA 308479 Query 75 AGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCC-CTCTAGAGATAGAGGT 133 || || | ||||||||||| |||| ||| ||| || |||| ||| || Sbjct 308480 TAATACACGCAAAACCTTACCAAGGCTTGTAATCTACTGCGAAACTATAGAAATATAG-- 308537 Query 134 TTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGTGTCGTGAG 193 | || || | ||||||||| ||||||| ||||||||||||||||| |||| Sbjct 308538 TGGAGGTTATCGGTA-----TGACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCTTGAG 308592 Query 194 ATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCT-TAGTTGCCATCATTAAGTT 252 ||||| |||||||||||| ||||||||||||||| | || ||||| |||| ||| Sbjct 308593 ATGTTTGGTTAAGTCCCGTAACGAGCGCAACCCT-ACTCTCTAGTTA-----ATTA-GTT 308645 Query 253 GGGCACTCTAAGTTGACTGCCG-GTGACAAACCGGAGGAAGGTGGGGACGACGTCAAATC 311 ||| |||||| || | | | |||||||| ||| | | ||||| || Sbjct 308646 -------CTAGAGTGACTGAATCGTAAGATAT---AGGAAGGTTGGGGCCAAGTCAAGTC 308695 Query 312 ATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATACAAAGGGCAGCG 371 ||||||||||||||| ||||||| || |||||||||||||| |||| | | || Sbjct 308696 ATCATGCCCCTTATGCCTTGGGCTGCAAACGTGCTACAATGGTAGGCACAATGTGTTGCA 308755 Query 372 AAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTGTAGTCTGCAAC 431 || |||| ||| |||| | |||| ||||||| ||||| || |||||| Sbjct 308756 AACTAGCGATAGTGAGCTAATCACCTAAAACCTATCTCAGTCCGGATAAAAGGCTGCAAT 308815 Query 432 TCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATGCTACGGTGAATACG 490 ||| |||| ||||| ||||||| ||||||||| | ||||| || | |||||||||| Sbjct 308816 TCGCCTATTTGAAGTTGGAATCACTAGTAATCCTGTGTCAGCTATATCAGGGTGAATACG 308875 Query 491 TTCCC 495 ||||| Sbjct 308876 TTCCC 308880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1499838056000