Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq137294 185 1e-44 seq54402 154 2e-35 seq22624 116 6e-24 seq5 84.2 3e-14 >seq137294 Length=355 Score = 185 bits (204), Expect = 1e-44 Identities = 195/252 (77%), Gaps = 10/252 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||| |||||||||||||||||||||| | ||| Sbjct 65 GTCAGTGTAGCGCGCGTGCAGCCCCGGACACCTAAGGGCATCACAGACCTGTTGTGGCC- 123 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | | ||||| | |||| | |||||||| ||||| | | || ||| | Sbjct 124 CAATCTCGCGT-GGCTGAACGCCACTTGTCCCTCTGAGAAGTTGGGGGACGCCGACCGCT 182 Query 131 AGTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | | | | | ||| |||||| | | |||||| |||||||||||||||||| || Sbjct 183 CGGGGGTCGCGTAAACTAGTTAGCATGCCAGAGTCTCGCTCGTTATCGGAATTAACCGGA 242 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||| ||||||| |||||||| ||||||||||| ||||||| || | ||||||||| Sbjct 243 CAAATCGCTCCACCGACTAAGAAGGGCCATGCACCGCCACCCACGGACCCGAGAAAGAGC 302 Query 247 TATCAATCTGTC 258 |||| |||||| Sbjct 303 CATCAGTCTGTC 314 >seq54402 Length=545 Score = 154 bits (170), Expect = 2e-35 Identities = 170/221 (77%), Gaps = 9/221 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||| |||||||||||||||||||||| ||| || Sbjct 219 GTCAGTGTAGCGCGCGTGCAGCCCCGGACACCTAAGGGCATCACAGACCTGTTGTTG-CT 161 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGA---AGCCAGCCACCAACC-AT 130 ||| | || |||||| | |||| | |||||||| ||| | | | || ||| | Sbjct 160 CAAGC-TCGCCTGGCTGAACGCCACTTGTCCCTCTGAGAGGTTGGGGGACGCCGACCGCT 102 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | | | |||||| | | |||||| ||||| |||||||||||| ||| Sbjct 101 CGGGGGTCGCGTAACGAGTTAGCATGCCAGAGTCTCGCTCGTTGTCGGAATTAACCGGAC 42 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 ||||| ||||||| |||||||| ||||||||||| |||||| Sbjct 41 AAATCGCTCCACCGACTAAGAAGGGCCATGCACCGCCACCC 1 >seq22624 Length=765 Score = 116 bits (128), Expect = 6e-24 Identities = 87/101 (86%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||| ||||| |||| | |||||||||||||||||||||||||||||| || Sbjct 162 GTCAGTGTAGCGCACGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 104 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 ||| ||| | ||||| | |||| | |||||||||||||| Sbjct 103 CAATCTTGTGTAGGCTGAATGCCACTTGTCCCTCTAAGAAG 63 >seq5 Length=21672913 Score = 84.2 bits (92), Expect = 3e-14 Identities = 85/110 (77%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||||| ||| |||| | | ||||||||||| | |||||||| Sbjct 21529555 CTAGTTAGCATGCCAGTGTCTCATTCATTATTGTAGTTAACCAGACAGACTTCTCCACCA 21529614 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCA 251 |||| ||| |||| |||| ||||| | ||| ||||||||||||| ||| Sbjct 21529615 ACTATGAATGGCCGTGCATTACCACTC--AGAGTCAAGAAAGAGCTGTCA 21529662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794663959725