Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq223 199 7e-49 seq44 167 4e-39 seq120550 134 2e-29 seq37 129 1e-27 seq374 75.2 2e-11 >seq223 Length=2682152 Score = 199 bits (220), Expect = 7e-49 Identities = 193/248 (78%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 |||||||||||||| ||||| ||| |||||||||| ||| |||| ||||||||||||| Sbjct 1010009 ACTAACCTGTCTCACAACGGTGTAATCCCAGCTCACATTCTCTATCAGTGGGTGAACAAC 1009950 Query 107 CCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAA 166 ||||| ||| |||||||||||| |||| |||||| || |||| ||||||||||||| Sbjct 1009949 CCAACACTTGGTGAATTCTGCTTCACAATGACAGGAAGTGCTGACACCGAAGGATCAAAA 1009890 Query 167 AGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 |||| | | ||||||| |||| || ||||||||| ||||| ||||| | ||||||||| Sbjct 1009889 AGCAGCAACACTATGAATGCTTAGCCGCCACAAGCTGGTTATGCCTGTTGGAACTTTTCT 1009830 Query 227 GGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTT 286 | ||| | || | || | || | ||| ||| ||||| |||||||||||| Sbjct 1009829 GATACCGCCTGCTTAAAGCCCAAAAGGTCAGAAGTGTCGTGAGGCCCCACTTTCATGGTC 1009770 Query 287 TGTATTCA 294 | |||||| Sbjct 1009769 TATATTCA 1009762 >seq44 Length=11989663 Score = 167 bits (184), Expect = 4e-39 Identities = 135/162 (83%), Gaps = 1/162 (1%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | |||||||| | | || || ||||| |||||||||||||||||||| Sbjct 2612733 TACTGAGCAGGATTACCATGGCAACAACACATCGTCAGTGGGGTAAAACTAACCTGTCTC 2612674 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | || |||||||||||||||||| |||| ||||||||||||||||||||| |||| | Sbjct 2612673 ACGATGGTCTAAACCCAGCTCACATTCCATATTAGTGGGTGAACAATCCATTGCTTGGTG 2612614 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161 ||||||||||| ||||||||||||||| ||||| |||||| Sbjct 2612613 AATTCTGCTTCATAATGATAGGAAGAGCCAACATCAAAGGAT 2612572 >seq120550 Length=383 Score = 134 bits (148), Expect = 2e-29 Identities = 96/109 (88%), Gaps = 1/109 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||||||| | ||||| || | | | |||| ||||||||||||||||||||||||| Sbjct 275 TACTAAGCAGGATTACTATCGCAACAATTAGTCAACAGTAGGGTAAAACTAACCTGTCTC 334 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 108 | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 335 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCC 383 >seq37 Length=12620877 Score = 129 bits (142), Expect = 1e-27 Identities = 98/116 (84%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||| ||||||||||||||| || | |||||| ||||||||| |||||||| Sbjct 7650152 TCATCAGTAGAATAAAACTAACCTGTCACACAAGGGTCTACTCCCAGCTCATGTTCCCTA 7650211 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146 |||||||||||||||||||| |||| || ||||||||| |||||||||| || Sbjct 7650212 TTAGTGGGTGAACAATCCAATGCTTGGTGACTTCTGCTTCACGATGATAGGAAAAG 7650267 >seq374 Length=747316 Score = 75.2 bits (82), Expect = 2e-11 Identities = 126/181 (70%), Gaps = 6/181 (3%) Strand=Plus/Plus Query 47 ACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAAT 106 || ||||||||||| |||||| | |||||| ||||||| | | ||| | || ||||| Sbjct 177024 ACCAACCTGTCTCACGACGGTTTGAACCCAACTCACGTATCTTTTTAATCGGCGAACAGC 177083 Query 107 CCAACGCTTACCGAATTCTGCTT---CGGTATGATAGGAAGAGCCGACATCGAAGGATCA 163 | ||| ||| | |||||| | | |||| || ||| ||||||||| | | || Sbjct 177084 CGAACCCTT---GGGAGCTGCTTCACCCCCAGGATAAGATGAGTCGACATCGAGGTAGCA 177140 Query 164 AAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTT 223 || | |||||| ||||||| ||||| | | || ||||||||| ||| |||| Sbjct 177141 AACAATCACGTCGATATGAACTCTTGGTGATTATTACCCTGTTATCCCTAGAGTAGCTTT 177200 Query 224 T 224 | Sbjct 177201 T 177201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852035661600