Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq374 152 1e-34 >seq374 Length=747316 Score = 152 bits (168), Expect = 1e-34 Identities = 156/201 (78%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||||| |||||||||| | | |||| || |||| || ||||||||||||||| Sbjct 307954 CTTTACAATCAGAAGACCTTCAT-CGTTCACGTGGTATTG-CTCCATCAGGCTTTCGCCC 307897 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| || ||||| ||||||||| |||||||||| | ||| || | ||||| | ||| Sbjct 307896 ATTGTGAAAAATTCCTCACTGCTGCTTCCCGTAGGAATATGGGCCATATCTCAATCCCAT 307837 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 || | ||| || |||||||| ||| ||| ||| || ||||||| ||| ||||| | Sbjct 307836 TGCGGCTGTCCAACCTCTCAGTTCAGCTACCCATCACCGGCTTGGTGGGCCTTTACCCCG 307777 Query 181 CCAACTAGCTAATCCGACCTA 201 ||||||| ||||| ||| || Sbjct 307776 CCAACTACCTAATAGGACATA 307756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1069033508000