Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq374 141 3e-31 >seq374 Length=747316 Score = 141 bits (156), Expect = 3e-31 Identities = 313/465 (67%), Gaps = 27/465 (6%) Strand=Plus/Plus Query 134 GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTT 193 |||||| |||||| || ||| | |||||||||||| | | | |||||| ||| Sbjct 178783 GACGCTAGTCCTAAAACTATATCGACAAAAACCAGCTATCAGGGAACTCGATTGGAATTT 178842 Query 194 CACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGC 253 |||| || |||| |||||| || ||||||| ||| |||||||||| || Sbjct 178843 CACCTCTTATCACAAGTCATCAGCTATCATTTCAACGACAGTCTGTTCGGTCCTTCATCT 178902 Query 254 GGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGT 313 | | ||| | |||||||||| |||| || || | ||||||||| || | Sbjct 178903 GATGTTATTCAAATTTCAACCTGCTCATGACAAGCTCGTCCCCTTTCGGGTCT--AT--T 178958 Query 314 GCCACTCAT-----ACGCCCTATTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTT 368 || ||| | |||||||||| |||||||||||||| | ||| | | | | || Sbjct 178959 GCAACTTACTAAAAACGCCCTATTAAGACTCGCTTTCGCTTCAGCTCCATCGTTCAGATT 179018 Query 369 -AACCTCGCGACACAACGCAA--ACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACC 425 ||| | || || |||| |||| | ||||||| |||||||| ||||||| | || Sbjct 179019 TAACTTTGCAACTT---GCAATAACTCTCCGGCTCATACTTCAAAACGCACGCCATTAC- 179074 Query 426 TGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATT 485 || | || | |||| ||| |||||||| | ||||| | ||||| Sbjct 179075 ----ACTTGAATGT-------GCTCTGACACTTTGTAGGCTAGTAATTTCATGATCTATT 179123 Query 486 TCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCA 545 |||||||| |||| ||||||| |||||| |||| |||||||| | |||||||| | Sbjct 179124 TCACTCCCATATCTGGGTTCTTTTCATCTTTCCTTCACAGTACTTGTTCACTATCGGTAA 179183 Query 546 CCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 | |||||||||||||| | | |||||| | |||||| || Sbjct 179184 ATGATTAGTATTTAGGCTTACCCGATGGTCCGGGTGGATTCAAAC 179228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1812570246400